RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 RXFP4Q8TDU9 374 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 MRPL53Q96EL3 112 aaKnown RBP3.66□□□□□ -1.82
FXN-205ENST00000498653 TXNDC17Q9BRA2 123 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 MAP6D1Q9H9H5 199 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 VAX2Q9UIW0 290 aa3.66□□□□□ -1.82
FXN-205ENST00000498653 YTHDF2Q9Y5A9 579 aaKnown RBP3.66□□□□□ -1.82
FXN-205ENST00000498653 ZNF705FA8MVS1 300 aaPredicted RBP3.65□□□□□ -1.83
FXN-205ENST00000498653 GGTLC3B5MD39 225 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 C11orf94C9JXX5 98 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 F6UZH7 168 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 K7EQM0 130 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 DUSP14O95147 198 aaKnown RBP3.65□□□□□ -1.83
FXN-205ENST00000498653 BCL2P10415 239 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 BTF3P20290 206 aaKnown RBP3.65□□□□□ -1.83
FXN-205ENST00000498653 ATP5G3P48201 142 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 ODF3L2Q3SX64 289 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 ZNF506Q5JVG8 444 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 EBLN2Q6P2I7 272 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 C5orf17Q8NAS9 161 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 OR10J6PQ8NGY7 276 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 RPUSD4Q96CM3 377 aaKnown RBP3.65□□□□□ -1.83
FXN-205ENST00000498653 FAM210AQ96ND0 272 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 TCEAL7Q9BRU2 100 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 EIF5A2Q9GZV4 153 aaKnown RBP3.65□□□□□ -1.83
FXN-205ENST00000498653 C11orf68Q9H3H3 251 aaKnown RBP3.65□□□□□ -1.83
FXN-205ENST00000498653 EPDR1Q9UM22 224 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 RPH3ALQ9UNE2 315 aa3.65□□□□□ -1.83
FXN-205ENST00000498653 A0A0J9YX75 114 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 SERTM2A0A1B0GWG4 89 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 RAB19A4D1S5 217 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 KNCNA6PVL3 124 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 M0R3E3 92 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 PEX7O00628 323 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 PDE6DO43924 150 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 TCRAP04437 139 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 AKR1C3P42330 323 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 GNG5P63218 68 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 MEF2BQ02080 365 aaPredicted RBP3.64□□□□□ -1.83
FXN-205ENST00000498653 HIST1H1AQ02539 215 aaPredicted RBP3.64□□□□□ -1.83
FXN-205ENST00000498653 PEA15Q15121 130 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 ACTL10Q5JWF8 245 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 TMEM78Q5T7P6 136 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 FOXI2Q6ZQN5 318 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 GOLT1AQ6ZVE7 132 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 Q6ZWC4 215 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 APRG1Q8IVJ8 170 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 STHQ8IWL8 128 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 CCDC28AQ8IWP9 274 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 OR8A1Q8NGG7 326 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 HIST1H2BAQ96A08 127 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 RARRES2Q99969 163 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 ATG101Q9BSB4 218 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 SAV1Q9H4B6 383 aaPredicted RBP3.64□□□□□ -1.83
FXN-205ENST00000498653 PPP1R14DQ9NXH3 145 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 C11orf21Q9P2W6 132 aa3.64□□□□□ -1.83
FXN-205ENST00000498653 IGKV2-40A0A087WW87 121 aaPredicted RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 RBAKDNA6NC62 111 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 LINC00862A6NCI5 91 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 FBLL1A6NHQ2 334 aaKnown RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 PRAC2D3DTV9 90 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 F6UB75 175 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 TMEM250H0YL14 139 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 H3BMM0 161 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 NDUFS6O75380 124 aaKnown RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 IGKV2D-40P01614 121 aaPredicted RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 S100A9P06702 114 aaKnown RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 NPSP0C0P6 89 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 ZNF705DP0CH99 300 aaPredicted RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 ZNF705BP0CI00 300 aaPredicted RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 HLA-DRB4P13762 266 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 CNN1P51911 297 aaKnown RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 DEFB1P60022 68 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 SUMO2P61956 95 aaKnown RBP3.63□□□□□ -1.83
FXN-205ENST00000498653 UBE2G1P62253 170 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 ERCC8Q13216 396 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 COMMD7Q86VX2 200 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 UBE2DNLQ8IWF7 75 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 CYB561D1Q8N8Q1 229 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 OR4B1Q8NGF8 309 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 C11orf52Q96A22 123 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 FMC1Q96HJ9 113 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 LINC00477Q96M19 166 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 AGPAT4-IT1Q9H0P7 198 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 SMDT1Q9H4I9 107 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 TREM1Q9NP99 234 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 MED9Q9NWA0 146 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 HLA-DRB4X5D2U9 266 aa3.63□□□□□ -1.83
FXN-205ENST00000498653 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 TRAV34A0A0B4J273 112 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 TRBV6-1A0A0K0K1D8 114 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 NBDYA0A0U1RRE5 68 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 IGKV3-20P01619 116 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 SRP19P09132 144 aaKnown RBP3.62□□□□□ -1.83
FXN-205ENST00000498653 RPL35AP18077 110 aaKnown RBP3.62□□□□□ -1.83
FXN-205ENST00000498653 TSPOP30536 169 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 LEPP41159 167 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 ZNF138P52744 262 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 CEBPGP53567 150 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 TAS2R60P59551 318 aa3.62□□□□□ -1.83
FXN-205ENST00000498653 FLI1Q01543 452 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms