RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ZNF471Q9BX82 626 aaPredicted RBP6.92□□□□□ -1.3
SRSF4-205ENST00000497015 AGPAT4-IT1Q9H0P7 198 aa6.92□□□□□ -1.3
SRSF4-205ENST00000497015 ARL2-SNX15V9GYD0 113 aa6.92□□□□□ -1.3
SRSF4-205ENST00000497015 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 IGHV3OR16-12A0A075B7B8 117 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 C7orf71A4D174 169 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 PGPA6NDG6 321 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 K7EQM0 130 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 RAB5CP51148 216 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
SRSF4-205ENST00000497015 GFI1BQ5VTD9 330 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 LINC01587Q99440 93 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 TCEAL7Q9BRU2 100 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 NDUFAF3Q9BU61 184 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 DKK2Q9UBU2 259 aa6.91□□□□□ -1.3
SRSF4-205ENST00000497015 IGKV2-40A0A087WW87 121 aaPredicted RBP6.9□□□□□ -1.3
SRSF4-205ENST00000497015 CBY3A6NI87 242 aa6.9□□□□□ -1.3
SRSF4-205ENST00000497015 EPM2AB3EWF7 344 aa6.9□□□□□ -1.3
SRSF4-205ENST00000497015 ZNF324O75467 553 aaPredicted RBP6.9□□□□□ -1.3
SRSF4-205ENST00000497015 IGKV2D-40P01614 121 aaPredicted RBP6.9□□□□□ -1.3
SRSF4-205ENST00000497015 GPX1P07203 203 aa6.9□□□□□ -1.3
SRSF4-205ENST00000497015 KRTAP10-2P60368 255 aa6.9□□□□□ -1.3
SRSF4-205ENST00000497015 ZNF726P1Q15940 193 aa6.9□□□□□ -1.3
SRSF4-205ENST00000497015 ZNF680Q8NEM1 530 aa6.9□□□□□ -1.3
SRSF4-205ENST00000497015 VGLL1Q99990 258 aa6.9□□□□□ -1.3
SRSF4-205ENST00000497015 GAGE12BA1L429 117 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 MAP1LC3B2A6NCE7 125 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 HMGB3O15347 200 aaKnown RBP6.89□□□□□ -1.31
SRSF4-205ENST00000497015 TCRAP04437 139 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 FHITP49789 147 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 ERCC8Q13216 396 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 ANXA2RQ3ZCQ2 193 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 SOHLH1Q5JUK2 328 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 FAM222AQ5U5X8 452 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 SSX7Q7RTT5 188 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 SLC51BQ86UW2 128 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 ZFAND2AQ8N6M9 145 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
SRSF4-205ENST00000497015 MBD3L1Q8WWY6 194 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 FAM210BQ96KR6 192 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 MAP1LC3BQ9GZQ8 125 aa6.89□□□□□ -1.31
SRSF4-205ENST00000497015 YTHDF2Q9Y5A9 579 aaKnown RBP6.89□□□□□ -1.31
SRSF4-205ENST00000497015 TIMM8BQ9Y5J9 83 aaPredicted RBP6.89□□□□□ -1.31
SRSF4-205ENST00000497015 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 ZNF705GA8MUZ8 300 aaPredicted RBP6.88□□□□□ -1.31
SRSF4-205ENST00000497015 PPT1P50897 306 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 IBA57Q5T440 356 aaKnown RBP6.88□□□□□ -1.31
SRSF4-205ENST00000497015 Q6AWC8 147 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 CYB561D1Q8N8Q1 229 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 TMEM75Q8N9X5 138 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 HIST1H2BAQ96A08 127 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 ATG101Q9BSB4 218 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 NDFIP1Q9BT67 221 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 EPDR1Q9UM22 224 aa6.88□□□□□ -1.31
SRSF4-205ENST00000497015 FAM74A7A6NL05 159 aa6.87□□□□□ -1.31
SRSF4-205ENST00000497015 GGTLC3B5MD39 225 aa6.87□□□□□ -1.31
SRSF4-205ENST00000497015 EIF3GO75821 320 aaKnown RBP eCLIP6.87□□□□□ -1.31
SRSF4-205ENST00000497015 XGP55808 180 aa6.87□□□□□ -1.31
SRSF4-205ENST00000497015 DAZ2Q13117 558 aaKnown RBP6.87□□□□□ -1.31
SRSF4-205ENST00000497015 RNF212Q495C1 297 aa6.87□□□□□ -1.31
SRSF4-205ENST00000497015 ZFP69Q49AA0 526 aa6.87□□□□□ -1.31
SRSF4-205ENST00000497015 GOLT1AQ6ZVE7 132 aa6.87□□□□□ -1.31
SRSF4-205ENST00000497015 EIF4E3Q8N5X7 224 aaKnown RBP6.87□□□□□ -1.31
SRSF4-205ENST00000497015 TP53TG3Q9ULZ0 132 aa6.87□□□□□ -1.31
SRSF4-205ENST00000497015 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
SRSF4-205ENST00000497015 TRAV1-1A0A0B4J248 108 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 SNURFLB1AK76 121 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 F6UZH7 168 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 TEX46H3BTG2 121 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 PRYO14603 147 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 AZU1P20160 251 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 RNASE4P34096 147 aaKnown RBP6.86□□□□□ -1.31
SRSF4-205ENST00000497015 SULT1A2P50226 295 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 EMP1P54849 157 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 DAD1P61803 113 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 CD300CQ08708 224 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 BTN1A1Q13410 526 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 TDRG1Q3Y452 100 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 SAPCD1Q5SSQ6 148 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 UBE2DNLQ8IWF7 75 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 IQCF2Q8IXL9 164 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 LINC00612Q8N6U2 182 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 Q8TAT8 98 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 C18orf15Q96N68 181 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 TXNDC17Q9BRA2 123 aa6.86□□□□□ -1.31
SRSF4-205ENST00000497015 IGHV1OR15-1A0A075B7D0 117 aa6.85□□□□□ -1.31
SRSF4-205ENST00000497015 TRAV21A0A0B4J279 112 aa6.85□□□□□ -1.31
SRSF4-205ENST00000497015 PRB4P10163 310 aaPredicted RBP6.85□□□□□ -1.31
SRSF4-205ENST00000497015 VPREB1P12018 145 aa6.85□□□□□ -1.31
SRSF4-205ENST00000497015 HTN1P15515 57 aa6.85□□□□□ -1.31
SRSF4-205ENST00000497015 FGF8P55075 233 aaPredicted RBP6.85□□□□□ -1.31
SRSF4-205ENST00000497015 GNG5P63218 68 aa6.85□□□□□ -1.31
SRSF4-205ENST00000497015 FLI1Q01543 452 aaPredicted RBP6.85□□□□□ -1.31
SRSF4-205ENST00000497015 PRR9Q5T870 116 aa6.85□□□□□ -1.31
SRSF4-205ENST00000497015 C9orf62Q8N4C0 152 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms