RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GAGE12GP0CL81 117 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 GAGE12IP0CL82 117 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 TCL1AP56279 114 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 DAZ2Q13117 558 aaKnown RBP13.77□□□□□ -0.21
HDAC4-212ENST00000495497 TDRG1Q3Y452 100 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 IBA57Q5T440 356 aaKnown RBP13.77□□□□□ -0.21
HDAC4-212ENST00000495497 Q6ZTI0 123 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 C11orf52Q96A22 123 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 TXNDC17Q9BRA2 123 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 VAX2Q9UIW0 290 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 KLK5Q9Y337 293 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-212ENST00000495497 ALMS1Q8TCU4 4167 aa13.76□□□□□ -0.21
HDAC4-212ENST00000495497 SACSQ9NZJ4 4579 aa13.76□□□□□ -0.21
HDAC4-212ENST00000495497 TRGV11A0A075B6L2 103 aa13.76□□□□□ -0.21
HDAC4-212ENST00000495497 IGLL5B9A064 214 aa13.76□□□□□ -0.21
HDAC4-212ENST00000495497 S100A9P06702 114 aaKnown RBP13.76□□□□□ -0.21
HDAC4-212ENST00000495497 RPL35P42766 123 aaKnown RBP13.76□□□□□ -0.21
HDAC4-212ENST00000495497 ZNF415Q09FC8 603 aa13.76□□□□□ -0.21
HDAC4-212ENST00000495497 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 IGHV3-16A0A0C4DH30 117 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 RBFOX3A6NFN3 312 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 FABP5P3A8MUU1 101 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 COX8CQ7Z4L0 72 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 BAGE2Q86Y30 109 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 LINC00612Q8N6U2 182 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 MED9Q9NWA0 146 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 MRPL16Q9NX20 251 aaKnown RBP13.75□□□□□ -0.21
HDAC4-212ENST00000495497 DNAH1Q9P2D7 4330 aa13.75□□□□□ -0.21
HDAC4-212ENST00000495497 RAB19A4D1S5 217 aa13.74□□□□□ -0.21
HDAC4-212ENST00000495497 PDE6DO43924 150 aa13.74□□□□□ -0.21
HDAC4-212ENST00000495497 SPINK4O60575 86 aa13.74□□□□□ -0.21
HDAC4-212ENST00000495497 SH2D1AO60880 128 aa13.74□□□□□ -0.21
HDAC4-212ENST00000495497 KCNS1Q96KK3 526 aa13.74□□□□□ -0.21
HDAC4-212ENST00000495497 IGKV3D-20A0A0C4DH25 116 aa13.73□□□□□ -0.21
HDAC4-212ENST00000495497 IGHV4-4A0A075B6R2 117 aa13.72□□□□□ -0.21
HDAC4-212ENST00000495497 TAGLN2P37802 199 aaKnown RBP13.72□□□□□ -0.21
HDAC4-212ENST00000495497 ZNF674Q2M3X9 581 aa13.72□□□□□ -0.21
HDAC4-212ENST00000495497 TOR2AQ5JU69 321 aa13.72□□□□□ -0.21
HDAC4-212ENST00000495497 ZNF506Q5JVG8 444 aa13.72□□□□□ -0.21
HDAC4-212ENST00000495497 FAM162BQ5T6X4 162 aa13.72□□□□□ -0.21
HDAC4-212ENST00000495497 MLST8Q9BVC4 326 aa13.72□□□□□ -0.21
HDAC4-212ENST00000495497 TENM2Q9NT68 2774 aa13.71□□□□□ -0.21
HDAC4-212ENST00000495497 F5H768 121 aa13.71□□□□□ -0.21
HDAC4-212ENST00000495497 ORM1P02763 201 aa13.71□□□□□ -0.21
HDAC4-212ENST00000495497 ATP5G1P05496 136 aa13.71□□□□□ -0.21
HDAC4-212ENST00000495497 CENPWQ5EE01 88 aa13.71□□□□□ -0.21
HDAC4-212ENST00000495497 APLNQ9ULZ1 77 aa13.71□□□□□ -0.21
HDAC4-212ENST00000495497 TRGV2A0A075B6R0 118 aa13.7□□□□□ -0.22
HDAC4-212ENST00000495497 M0R036 132 aa13.7□□□□□ -0.22
HDAC4-212ENST00000495497 IGLV2-8P01709 118 aa13.7□□□□□ -0.22
HDAC4-212ENST00000495497 PRR27Q6MZM9 219 aa13.7□□□□□ -0.22
HDAC4-212ENST00000495497 FAM210AQ96ND0 272 aa13.7□□□□□ -0.22
HDAC4-212ENST00000495497 SPXQ9BT56 116 aa13.7□□□□□ -0.22
HDAC4-212ENST00000495497 EIF5A2Q9GZV4 153 aaKnown RBP13.7□□□□□ -0.22
HDAC4-212ENST00000495497 TMSB15BA0A087X1C1 80 aa13.69□□□□□ -0.22
HDAC4-212ENST00000495497 PGPEP1LA6NFU8 196 aa13.69□□□□□ -0.22
HDAC4-212ENST00000495497 B4DEV8 164 aa13.69□□□□□ -0.22
HDAC4-212ENST00000495497 KRBOX1C9JBD0 128 aa13.69□□□□□ -0.22
HDAC4-212ENST00000495497 TRBV20OR9-2A0A075B6H5 130 aa13.68□□□□□ -0.22
HDAC4-212ENST00000495497 GRIFINA4D1Z8 144 aa13.68□□□□□ -0.22
HDAC4-212ENST00000495497 HOXA5P20719 270 aa13.68□□□□□ -0.22
HDAC4-212ENST00000495497 GNG4P50150 75 aa13.68□□□□□ -0.22
HDAC4-212ENST00000495497 LGALS9BQ3B8N2 356 aa13.68□□□□□ -0.22
HDAC4-212ENST00000495497 TMEM88Q6PEY1 159 aa13.68□□□□□ -0.22
HDAC4-212ENST00000495497 RYR2Q92736 4967 aa13.68□□□□□ -0.22
HDAC4-212ENST00000495497 IGHV3-53P01767 116 aa13.67□□□□□ -0.22
HDAC4-212ENST00000495497 MGST1P10620 155 aaKnown RBP13.67□□□□□ -0.22
HDAC4-212ENST00000495497 RNASE3P12724 160 aaKnown RBP13.67□□□□□ -0.22
HDAC4-212ENST00000495497 CEBPGP53567 150 aa13.67□□□□□ -0.22
HDAC4-212ENST00000495497 OR5I1Q13606 314 aa13.67□□□□□ -0.22
HDAC4-212ENST00000495497 ZNF575Q86XF7 245 aa13.67□□□□□ -0.22
HDAC4-212ENST00000495497 HYDINQ4G0P3 5121 aa13.66□□□□□ -0.22
HDAC4-212ENST00000495497 RYR3Q15413 4870 aa13.66□□□□□ -0.22
HDAC4-212ENST00000495497 M0R2P5 195 aa13.66□□□□□ -0.22
HDAC4-212ENST00000495497 RPL19P84098 196 aaKnown RBP13.66□□□□□ -0.22
HDAC4-212ENST00000495497 LINC01559Q495D7 138 aa13.66□□□□□ -0.22
HDAC4-212ENST00000495497 C9orf85Q96MD7 179 aa13.66□□□□□ -0.22
HDAC4-212ENST00000495497 NDUFAF3Q9BU61 184 aa13.66□□□□□ -0.22
HDAC4-212ENST00000495497 LCE6AA0A183 80 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 C9JCJ5 164 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 TMEM250H0YL14 139 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 S100A4P26447 101 aaKnown RBP13.65□□□□□ -0.22
HDAC4-212ENST00000495497 ASIPP42127 132 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 RASL10AQ92737 203 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 C18orf15Q96N68 181 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 PARLQ9H300 379 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 VPS13DQ5THJ4 4388 aa13.65□□□□□ -0.22
HDAC4-212ENST00000495497 SFTA3P0C7M3 94 aa13.64□□□□□ -0.23
HDAC4-212ENST00000495497 A0A0J9YY99 117 aa13.63□□□□□ -0.23
HDAC4-212ENST00000495497 H3BVH4 76 aa13.63□□□□□ -0.23
HDAC4-212ENST00000495497 SRP19P09132 144 aaKnown RBP13.63□□□□□ -0.23
HDAC4-212ENST00000495497 TCTAP57738 103 aa13.63□□□□□ -0.23
HDAC4-212ENST00000495497 SRSF3P84103 164 aaKnown RBP13.63□□□□□ -0.23
HDAC4-212ENST00000495497 POM121L12Q8N7R1 296 aa13.63□□□□□ -0.23
HDAC4-212ENST00000495497 FAM210BQ96KR6 192 aa13.63□□□□□ -0.23
HDAC4-212ENST00000495497 LY6G6CO95867 125 aa13.62□□□□□ -0.23
HDAC4-212ENST00000495497 ARMS2P0C7Q2 107 aa13.62□□□□□ -0.23
HDAC4-212ENST00000495497 IFITM2Q01629 132 aa13.62□□□□□ -0.23
HDAC4-212ENST00000495497 ZNF876PQ49A33 203 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms