RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 LINC01551Q86U37 167 aa10.82□□□□□ -0.68
ACTB-213ENST00000493945 OCC1Q8TAD7 63 aa10.82□□□□□ -0.68
ACTB-213ENST00000493945 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
ACTB-213ENST00000493945 KRBOX1C9JBD0 128 aa10.81□□□□□ -0.68
ACTB-213ENST00000493945 C9JQL5 133 aa10.81□□□□□ -0.68
ACTB-213ENST00000493945 CXCL1P09341 107 aa10.81□□□□□ -0.68
ACTB-213ENST00000493945 ZNF80P51504 273 aaPredicted RBP10.81□□□□□ -0.68
ACTB-213ENST00000493945 FAM231DQ6ZW35 169 aa10.81□□□□□ -0.68
ACTB-213ENST00000493945 RETNQ9HD89 108 aa10.81□□□□□ -0.68
ACTB-213ENST00000493945 PGPEP1LA6NFU8 196 aa10.8□□□□□ -0.68
ACTB-213ENST00000493945 ZNF705GA8MUZ8 300 aaPredicted RBP10.8□□□□□ -0.68
ACTB-213ENST00000493945 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
ACTB-213ENST00000493945 IGLV2-8P01709 118 aa10.8□□□□□ -0.68
ACTB-213ENST00000493945 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
ACTB-213ENST00000493945 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
ACTB-213ENST00000493945 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
ACTB-213ENST00000493945 SPXQ9BT56 116 aa10.8□□□□□ -0.68
ACTB-213ENST00000493945 TIMM8BQ9Y5J9 83 aaPredicted RBP10.8□□□□□ -0.68
ACTB-213ENST00000493945 U3KQK5 164 aa10.8□□□□□ -0.68
ACTB-213ENST00000493945 X6R8D5 127 aa10.8□□□□□ -0.68
ACTB-213ENST00000493945 IGHV4-28A0A0C4DH34 117 aa10.79□□□□□ -0.68
ACTB-213ENST00000493945 M0R036 132 aa10.79□□□□□ -0.68
ACTB-213ENST00000493945 GATCO43716 136 aaKnown RBP10.79□□□□□ -0.68
ACTB-213ENST00000493945 RPL23P62829 140 aaKnown RBP10.79□□□□□ -0.68
ACTB-213ENST00000493945 CT83Q5H943 113 aa10.79□□□□□ -0.68
ACTB-213ENST00000493945 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
ACTB-213ENST00000493945 RNASE8Q8TDE3 154 aaKnown RBP10.79□□□□□ -0.68
ACTB-213ENST00000493945 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
ACTB-213ENST00000493945 OSTCQ9NRP0 149 aa10.79□□□□□ -0.68
ACTB-213ENST00000493945 MEGF8Q7Z7M0 2845 aa10.79□□□□□ -0.68
ACTB-213ENST00000493945 FBN3Q75N90 2809 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 C19orf71A6NCJ1 209 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 LYRM9A8MSI8 78 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 A8MWL6 223 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 TYMSP04818 313 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 TCL1AP56279 114 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 Q8NAQ8 132 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 SFRP2Q96HF1 295 aa10.78□□□□□ -0.68
ACTB-213ENST00000493945 A0A1W2PPQ1 181 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 K7EN84 100 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 MT-ND4LP03901 98 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 MED14OSP0DP75 135 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 CRIP1P50238 77 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 SYT8Q8NBV8 401 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 OR10G8Q8NGN5 311 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 IL17DQ8TAD2 202 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 NDUFAF3Q9BU61 184 aa10.77□□□□□ -0.69
ACTB-213ENST00000493945 EMP1P54849 157 aa10.76□□□□□ -0.69
ACTB-213ENST00000493945 DNLZQ5SXM8 178 aa10.76□□□□□ -0.69
ACTB-213ENST00000493945 NUDT10Q8NFP7 164 aa10.76□□□□□ -0.69
ACTB-213ENST00000493945 ANAPC16Q96DE5 110 aa10.76□□□□□ -0.69
ACTB-213ENST00000493945 NUDT11Q96G61 164 aa10.76□□□□□ -0.69
ACTB-213ENST00000493945 RNASE7Q9H1E1 156 aaKnown RBP10.76□□□□□ -0.69
ACTB-213ENST00000493945 IL36BQ9NZH7 164 aa10.76□□□□□ -0.69
ACTB-213ENST00000493945 TMSB15BA0A087X1C1 80 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 IGKV3D-20A0A0C4DH25 116 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 IGHV3-16A0A0C4DH30 117 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 DAZ2Q13117 558 aaKnown RBP10.75□□□□□ -0.69
ACTB-213ENST00000493945 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 SVBPQ8N300 66 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 TP53TG3Q9ULZ0 132 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 CARHSP1Q9Y2V2 147 aaKnown RBP10.75□□□□□ -0.69
ACTB-213ENST00000493945 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
ACTB-213ENST00000493945 A0A0J9YWU9 116 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 F2Z2F3 143 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 M0R2P5 195 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 SNAPINO95295 136 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 RPL19P84098 196 aaKnown RBP10.74□□□□□ -0.69
ACTB-213ENST00000493945 FER1L6-AS1Q8NA97 138 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 GFRA4Q9GZZ7 299 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 GSN-AS1Q9NRJ2 163 aa10.74□□□□□ -0.69
ACTB-213ENST00000493945 H3BVH4 76 aa10.73□□□□□ -0.69
ACTB-213ENST00000493945 DAD1P61803 113 aa10.73□□□□□ -0.69
ACTB-213ENST00000493945 RHEBQ15382 184 aa10.73□□□□□ -0.69
ACTB-213ENST00000493945 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
ACTB-213ENST00000493945 ZFP82Q8N141 532 aa10.73□□□□□ -0.69
ACTB-213ENST00000493945 C11orf72Q8NBR9 251 aa10.73□□□□□ -0.69
ACTB-213ENST00000493945 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
ACTB-213ENST00000493945 C11orf21Q9P2W6 132 aa10.73□□□□□ -0.69
ACTB-213ENST00000493945 TRGV1A0A0A0MS02 117 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 GRIFINA4D1Z8 144 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 GNRH2O43555 120 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 APOC3P02656 99 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 OR5AL1P0C617 328 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 ADCYAP1P18509 176 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 AZU1P20160 251 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 CACNG7P62955 275 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 FAM222AQ5U5X8 452 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 Q6ZQT7 251 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 C11orf45Q8TAV5 145 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 TSKUQ8WUA8 353 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 TPPP3Q9BW30 176 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 CTDSP1Q9GZU7 261 aa10.72□□□□□ -0.69
ACTB-213ENST00000493945 DKK2Q9UBU2 259 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms