RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 RPL32P62910 135 aaKnown RBP9□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE4Q13068 117 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 C3orf36Q3SXR2 165 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 DMXL1Q9Y485 3027 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 DEFB104AQ8WTQ1 72 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 PCNX1Q96RV3 2341 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 CACNA1BQ00975 2339 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 BUB1B-PAK6H3BSN5 160 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 CFC1BP0CG36 223 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 CFC1P0CG37 223 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 ONECUT1Q9UBC0 465 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 SNCGO76070 127 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 COX6B1P14854 86 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 SRSF2Q01130 221 aaKnown RBP8.99□□□□□ -0.97
HDAC4-210ENST00000493582 ZNF672Q499Z4 452 aaPredicted RBP8.99□□□□□ -0.97
HDAC4-210ENST00000493582 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 Q6ZS46 218 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 TRPT1Q86TN4 253 aaKnown RBP8.99□□□□□ -0.97
HDAC4-210ENST00000493582 BAALCQ8WXS3 180 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 SMIM2Q9BVW6 85 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 C9JAW5 83 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 F8W735 103 aaPredicted RBP8.99□□□□□ -0.97
HDAC4-210ENST00000493582 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
HDAC4-210ENST00000493582 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 SLC25A20O43772 301 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 MFAP4P55083 255 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 FANCD2OSQ96PS1 177 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 FAM110AQ9BQ89 295 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 RAB1BQ9H0U4 201 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 ATMQ13315 3056 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 A0A0J9YY99 117 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 ADIPOQQ15848 244 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 TOMM6Q96B49 74 aa8.98□□□□□ -0.97
HDAC4-210ENST00000493582 IGHV3-66A0A0C4DH42 116 aa8.97□□□□□ -0.97
HDAC4-210ENST00000493582 H7C2G1 150 aa8.97□□□□□ -0.97
HDAC4-210ENST00000493582 C2orf66Q6UXQ4 117 aa8.97□□□□□ -0.97
HDAC4-210ENST00000493582 RPL39LQ96EH5 51 aaKnown RBP8.97□□□□□ -0.97
HDAC4-210ENST00000493582 IGHV3OR16-13A0A075B7E8 117 aa8.97□□□□□ -0.97
HDAC4-210ENST00000493582 IGHV3-74A0A0B4J1X5 117 aa8.97□□□□□ -0.97
HDAC4-210ENST00000493582 IFITM1P13164 125 aa8.97□□□□□ -0.97
HDAC4-210ENST00000493582 C10orf126Q8N4M7 172 aa8.97□□□□□ -0.97
HDAC4-210ENST00000493582 MBD3L4A6NDZ8 208 aaPredicted RBP8.96□□□□□ -0.97
HDAC4-210ENST00000493582 MBD3L3A6NE82 208 aaPredicted RBP8.96□□□□□ -0.97
HDAC4-210ENST00000493582 MBD3L5A6NJ08 208 aaPredicted RBP8.96□□□□□ -0.97
HDAC4-210ENST00000493582 TIMM23O14925 209 aa8.96□□□□□ -0.97
HDAC4-210ENST00000493582 FAM159AQ6UWV7 190 aa8.96□□□□□ -0.97
HDAC4-210ENST00000493582 MBD3L2Q8NHZ7 208 aaPredicted RBP8.96□□□□□ -0.97
HDAC4-210ENST00000493582 AGPAT4-IT1Q9H0P7 198 aa8.96□□□□□ -0.97
HDAC4-210ENST00000493582 C21orf62Q9NYP8 219 aa8.96□□□□□ -0.98
HDAC4-210ENST00000493582 MGAQ8IWI9 3026 aa8.96□□□□□ -0.98
HDAC4-210ENST00000493582 SUMO2P61956 95 aaKnown RBP8.96□□□□□ -0.98
HDAC4-210ENST00000493582 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
HDAC4-210ENST00000493582 NTN5Q8WTR8 489 aaPredicted RBP8.96□□□□□ -0.98
HDAC4-210ENST00000493582 PRO1854Q9UHT4 67 aa8.96□□□□□ -0.98
HDAC4-210ENST00000493582 IGHV3-30P01768 117 aa8.95□□□□□ -0.98
HDAC4-210ENST00000493582 IGHV3-30-5P0DP03 117 aa8.95□□□□□ -0.98
HDAC4-210ENST00000493582 C11orf86A6NJI1 115 aa8.95□□□□□ -0.98
HDAC4-210ENST00000493582 J3KRW8 73 aa8.95□□□□□ -0.98
HDAC4-210ENST00000493582 M0R381 172 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 BRI3O95415 125 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 CRYGDP07320 174 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 CTSGP08311 255 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 Q8N1Y9 231 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 FAM215AQ9Y5M1 114 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 IGLV11-55A0A075B6I3 123 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 TEX49A0A1B0GTD5 131 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 TSPEAR-AS2P59090 65 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 TECTAO75443 2155 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 TRAV17A0A0B4J275 112 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 DUSP14O95147 198 aaKnown RBP8.94□□□□□ -0.98
HDAC4-210ENST00000493582 ASIPP42127 132 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 ASCL5Q7RTU5 278 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 C3orf56Q8N813 242 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 MSRB2Q9Y3D2 182 aa8.94□□□□□ -0.98
HDAC4-210ENST00000493582 ARHGAP32A7KAX9 2087 aa8.93□□□□□ -0.98
HDAC4-210ENST00000493582 ELANEP08246 267 aa8.93□□□□□ -0.98
HDAC4-210ENST00000493582 C14orf178Q8N769 122 aaPredicted RBP8.93□□□□□ -0.98
HDAC4-210ENST00000493582 CACNA1HO95180 2353 aa8.93□□□□□ -0.98
HDAC4-210ENST00000493582 IGHV3-49A0A0A0MS15 119 aa8.93□□□□□ -0.98
HDAC4-210ENST00000493582 NBR2O15453 112 aa8.93□□□□□ -0.98
HDAC4-210ENST00000493582 HES1Q14469 280 aa8.93□□□□□ -0.98
HDAC4-210ENST00000493582 NUP37Q8NFH4 326 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 ODF3Q96PU9 254 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 ARRDC1-AS1Q9H2J1 176 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 RELNP78509 3460 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 TTC28Q96AY4 2481 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 ABCA4P78363 2273 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 A4D1N5 150 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 LYNX1G3V0Z9 82 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 EIF4EBP3O60516 100 aaPredicted RBP8.92□□□□□ -0.98
HDAC4-210ENST00000493582 LYNX1P0DP58 116 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 CD59P13987 128 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
HDAC4-210ENST00000493582 SLC50A1Q9BRV3 221 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms