RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
USP39-217ENST00000491659 GGTLC3B5MD39 225 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 SLC51BQ86UW2 128 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 KCNRGQ8N5I3 272 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 TVP23CQ96ET8 276 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 VSIG2Q96IQ7 327 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 KCNS1Q96KK3 526 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 EPDR1Q9UM22 224 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 PSG8Q9UQ74 426 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 HECTD4Q9Y4D8 3996 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 DNAH2Q9P225 4427 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 A0A096LPF7 62 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 PAX4O43316 350 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 S100A1P23297 94 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 FLI1Q01543 452 aaPredicted RBP10.47□□□□□ -0.73
USP39-217ENST00000491659 SLAQ13239 276 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 ZNF726P1Q15940 193 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 TMEM75Q8N9X5 138 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 PRO0255Q9UI72 69 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 ICOSQ9Y6W8 199 aa10.47□□□□□ -0.73
USP39-217ENST00000491659 TRGV4A0A0C4DH28 118 aa10.46□□□□□ -0.73
USP39-217ENST00000491659 TYMSP04818 313 aa10.46□□□□□ -0.73
USP39-217ENST00000491659 PRNTQ86SH4 94 aa10.46□□□□□ -0.73
USP39-217ENST00000491659 C8orf49Q96NF6 230 aa10.46□□□□□ -0.73
USP39-217ENST00000491659 UPK3BQ9BT76 320 aa10.46□□□□□ -0.73
USP39-217ENST00000491659 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.73
USP39-217ENST00000491659 MRPS16Q9Y3D3 137 aaKnown RBP10.46□□□□□ -0.73
USP39-217ENST00000491659 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 A0A1B0GVY2 172 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 MAP1LC3B2A6NCE7 125 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 BCL2L11O43521 198 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 GCGP01275 180 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 PPT1P50897 306 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 FGF8P55075 233 aaPredicted RBP10.45□□□□□ -0.74
USP39-217ENST00000491659 UBE2G2P60604 165 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 EIF5AP63241 154 aaKnown RBP10.45□□□□□ -0.74
USP39-217ENST00000491659 ESRGQ1W209 222 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 SMUG1Q53HV7 270 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 RASL10AQ92737 203 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 NKX6-2Q9C056 277 aaPredicted RBP10.45□□□□□ -0.74
USP39-217ENST00000491659 MAP1LC3BQ9GZQ8 125 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 Q9H8V8 135 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
USP39-217ENST00000491659 M0R2P5 195 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 GNRH2O43555 120 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 IGLV2-11P01706 119 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 CRYBA4P53673 196 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 FHL2Q14192 279 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 SAPCD1Q5SSQ6 148 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 SLC7A5P1Q8MH63 180 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 C6orf223Q8N319 242 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 DNAH17Q9UFH2 4485 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 FAT2Q9NYQ8 4349 aa10.44□□□□□ -0.74
USP39-217ENST00000491659 TRAV4A0A0B4J268 109 aa10.43□□□□□ -0.74
USP39-217ENST00000491659 PEX7O00628 323 aa10.43□□□□□ -0.74
USP39-217ENST00000491659 PFN1P07737 140 aaKnown RBP10.43□□□□□ -0.74
USP39-217ENST00000491659 SFTA3P0C7M3 94 aa10.43□□□□□ -0.74
USP39-217ENST00000491659 CLLU1Q5K131 121 aa10.43□□□□□ -0.74
USP39-217ENST00000491659 STOML3Q8TAV4 291 aa10.43□□□□□ -0.74
USP39-217ENST00000491659 PCNPQ8WW12 178 aaKnown RBP10.43□□□□□ -0.74
USP39-217ENST00000491659 ZNF479Q96JC4 524 aa10.43□□□□□ -0.74
USP39-217ENST00000491659 FAM210AQ96ND0 272 aa10.43□□□□□ -0.74
USP39-217ENST00000491659 ZNF471Q9BX82 626 aaPredicted RBP10.43□□□□□ -0.74
USP39-217ENST00000491659 FAM74A7A6NL05 159 aa10.42□□□□□ -0.74
USP39-217ENST00000491659 ZNF80P51504 273 aaPredicted RBP10.42□□□□□ -0.74
USP39-217ENST00000491659 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
USP39-217ENST00000491659 OR4C5Q8NGB2 326 aa10.42□□□□□ -0.74
USP39-217ENST00000491659 HIST1H2BAQ96A08 127 aa10.42□□□□□ -0.74
USP39-217ENST00000491659 TRAV34A0A0B4J273 112 aa10.41□□□□□ -0.74
USP39-217ENST00000491659 SRIP30626 198 aa10.41□□□□□ -0.74
USP39-217ENST00000491659 Q86TA4 180 aa10.41□□□□□ -0.74
USP39-217ENST00000491659 ARL2-SNX15V9GYD0 113 aa10.41□□□□□ -0.74
USP39-217ENST00000491659 A0A1W2PPQ1 181 aa10.4□□□□□ -0.74
USP39-217ENST00000491659 ORM1P02763 201 aa10.4□□□□□ -0.74
USP39-217ENST00000491659 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
USP39-217ENST00000491659 TPT1P13693 172 aaKnown RBP10.4□□□□□ -0.74
USP39-217ENST00000491659 EIF5AL1Q6IS14 154 aaKnown RBP10.4□□□□□ -0.74
USP39-217ENST00000491659 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
USP39-217ENST00000491659 C11orf21Q9P2W6 132 aa10.4□□□□□ -0.74
USP39-217ENST00000491659 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 UMAD1C9J7I0 102 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 C9JCJ5 164 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 K7EQD1 137 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 FHITP49789 147 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 UBE2G1P62253 170 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 NEGR1Q7Z3B1 354 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
USP39-217ENST00000491659 SIVA1O15304 175 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 NXPH4O95158 308 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 GYPEP15421 78 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 ZNF876PQ49A33 203 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 CST9LP1Q5W188 147 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 ALKAL2Q6UX46 152 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 FAM213BQ8TBF2 198 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 FMC1Q96HJ9 113 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 C9orf85Q96MD7 179 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 TXNDC17Q9BRA2 123 aa10.38□□□□□ -0.75
USP39-217ENST00000491659 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms