RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CYB561D1Q8N8Q1 229 aa11.49□□□□□ -0.57
PDLIM2-217ENST00000491330 A0A096LPF7 62 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 M0R2P5 195 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 EREGO14944 169 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 SIVA1O15304 175 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 PPT1P50897 306 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 SAPCD1Q5SSQ6 148 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 SH2D6Q7Z4S9 175 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 OR4C5Q8NGB2 326 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 RASL10AQ92737 203 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 HIST1H2BAQ96A08 127 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 EPDR1Q9UM22 224 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 MUC4Q99102 2169 aa11.48□□□□□ -0.57
PDLIM2-217ENST00000491330 C9JCJ5 164 aa11.47□□□□□ -0.57
PDLIM2-217ENST00000491330 BCL2L11O43521 198 aa11.47□□□□□ -0.57
PDLIM2-217ENST00000491330 CIDEAO60543 219 aa11.47□□□□□ -0.57
PDLIM2-217ENST00000491330 CRYBA4P53673 196 aa11.47□□□□□ -0.57
PDLIM2-217ENST00000491330 SUMO1P63165 101 aaKnown RBP11.47□□□□□ -0.57
PDLIM2-217ENST00000491330 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
PDLIM2-217ENST00000491330 MDFICQ9P1T7 246 aa11.47□□□□□ -0.57
PDLIM2-217ENST00000491330 C16orf90A8MZG2 172 aa11.46□□□□□ -0.57
PDLIM2-217ENST00000491330 F6UZH7 168 aa11.46□□□□□ -0.57
PDLIM2-217ENST00000491330 FHITP49789 147 aa11.46□□□□□ -0.57
PDLIM2-217ENST00000491330 LGALSLQ3ZCW2 172 aaPredicted RBP11.46□□□□□ -0.57
PDLIM2-217ENST00000491330 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.57
PDLIM2-217ENST00000491330 TRAV4A0A0B4J268 109 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 MAP1LC3B2A6NCE7 125 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 K7EP13 123 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 TPT1P13693 172 aaKnown RBP11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 FLI1Q01543 452 aaPredicted RBP11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 TNP2Q05952 138 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 ZNF726P1Q15940 193 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 SMUG1Q53HV7 270 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 TCTE3Q8IZS6 198 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 ZNF471Q9BX82 626 aaPredicted RBP11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 MAP1LC3BQ9GZQ8 125 aa11.45□□□□□ -0.58
PDLIM2-217ENST00000491330 VPS13DQ5THJ4 4388 aa11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 PFDN1O60925 122 aa11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 EIF3GO75821 320 aaKnown RBP eCLIP11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 NXPH4O95158 308 aa11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 IFNA7P01567 189 aa11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 FHL2Q14192 279 aa11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 OR11H4Q8NGC9 324 aa11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 PSG8Q9UQ74 426 aa11.44□□□□□ -0.58
PDLIM2-217ENST00000491330 SMLR1H3BR10 107 aa11.43□□□□□ -0.58
PDLIM2-217ENST00000491330 PFN1P07737 140 aaKnown RBP11.43□□□□□ -0.58
PDLIM2-217ENST00000491330 EVI2AP22794 236 aa11.43□□□□□ -0.58
PDLIM2-217ENST00000491330 RAB5CP51148 216 aa11.43□□□□□ -0.58
PDLIM2-217ENST00000491330 GNG5P63218 68 aa11.43□□□□□ -0.58
PDLIM2-217ENST00000491330 Q6ZQT7 251 aa11.43□□□□□ -0.58
PDLIM2-217ENST00000491330 LY96Q9Y6Y9 160 aa11.43□□□□□ -0.58
PDLIM2-217ENST00000491330 DNAH6Q9C0G6 4158 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 TRAV8-1A0A0A6YYK1 113 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 FAM74A7A6NL05 159 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 GNRH2O43555 120 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 GYPEP15421 78 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 PRNTQ86SH4 94 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 NHLRC2Q8NBF2 726 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 MBD3L1Q8WWY6 194 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 ZNF479Q96JC4 524 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 PRADC1Q9BSG0 188 aa11.42□□□□□ -0.58
PDLIM2-217ENST00000491330 NACAE9PAV3 2078 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 IGHV3-16A0A0C4DH30 117 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 PEX7O00628 323 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 GCGP01275 180 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 IGLV2-11P01706 119 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 SFTA3P0C7M3 94 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 S100A4P26447 101 aaKnown RBP11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 ZNF876PQ49A33 203 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 Q6ZNX1 250 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 TMUB2Q71RG4 321 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 TVP23CQ96ET8 276 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
PDLIM2-217ENST00000491330 TRBV6-1A0A0K0K1D8 114 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 TEX46H3BTG2 121 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 K7EQD1 137 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 TYMSP04818 313 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 S100A9P06702 114 aaKnown RBP11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 C10orf126Q8N4M7 172 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 FMC1Q96HJ9 113 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 SGK494Q96LW2 274 aa11.4□□□□□ -0.58
PDLIM2-217ENST00000491330 C1QBP02746 253 aa11.39□□□□□ -0.59
PDLIM2-217ENST00000491330 FGF8P55075 233 aaPredicted RBP11.39□□□□□ -0.59
PDLIM2-217ENST00000491330 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
PDLIM2-217ENST00000491330 PTH2Q96A98 100 aa11.39□□□□□ -0.59
PDLIM2-217ENST00000491330 FABP5P3A8MUU1 101 aa11.38□□□□□ -0.59
PDLIM2-217ENST00000491330 ERVFC1-1P60608 527 aa11.38□□□□□ -0.59
PDLIM2-217ENST00000491330 PIK3CD-AS1Q5SR53 167 aa11.38□□□□□ -0.59
PDLIM2-217ENST00000491330 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
PDLIM2-217ENST00000491330 SFT2D1Q8WV19 159 aa11.38□□□□□ -0.59
PDLIM2-217ENST00000491330 TRAV8-6A0A0B4J262 113 aa11.37□□□□□ -0.59
PDLIM2-217ENST00000491330 H2AFB1P0C5Y9 115 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms