RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
TRA2A-208ENST00000490942 PRM2P04554 102 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 CRIP1P50238 77 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 EMP1P54849 157 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 ZNF415Q09FC8 603 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 PEA15Q15121 130 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 CENPWQ5EE01 88 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 Q6ZQT7 251 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 LINC00612Q8N6U2 182 aa11.31□□□□□ -0.6
TRA2A-208ENST00000490942 MUC21Q5SSG8 566 aa11.3□□□□□ -0.6
TRA2A-208ENST00000490942 C18orf15Q96N68 181 aa11.3□□□□□ -0.6
TRA2A-208ENST00000490942 SPXQ9BT56 116 aa11.3□□□□□ -0.6
TRA2A-208ENST00000490942 SH2D1AO60880 128 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 SRP19P09132 144 aaKnown RBP11.29□□□□□ -0.6
TRA2A-208ENST00000490942 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 PCNPQ8WW12 178 aaKnown RBP11.29□□□□□ -0.6
TRA2A-208ENST00000490942 PARLQ9H300 379 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 GSN-AS1Q9NRJ2 163 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 C11orf21Q9P2W6 132 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 NAGKQ9UJ70 344 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 CELA1Q9UNI1 258 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
TRA2A-208ENST00000490942 TRBV20OR9-2A0A075B6H5 130 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 IGKV3D-20A0A0C4DH25 116 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 RAB19A4D1S5 217 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 NUPR2A6NF83 97 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 TYMSP04818 313 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 CXCL1P09341 107 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 NANOS2P60321 138 aaKnown RBP11.28□□□□□ -0.6
TRA2A-208ENST00000490942 FAM74A3Q4VXF1 159 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 NDUFAF3Q9BU61 184 aa11.28□□□□□ -0.6
TRA2A-208ENST00000490942 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
TRA2A-208ENST00000490942 SPINK4O60575 86 aa11.27□□□□□ -0.61
TRA2A-208ENST00000490942 DAD1P61803 113 aa11.27□□□□□ -0.61
TRA2A-208ENST00000490942 NHLRC2Q8NBF2 726 aa11.27□□□□□ -0.61
TRA2A-208ENST00000490942 PTH2Q96A98 100 aa11.27□□□□□ -0.61
TRA2A-208ENST00000490942 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
TRA2A-208ENST00000490942 KRBOX1C9JBD0 128 aa11.26□□□□□ -0.61
TRA2A-208ENST00000490942 GNRH2O43555 120 aa11.26□□□□□ -0.61
TRA2A-208ENST00000490942 ORM1P02763 201 aa11.26□□□□□ -0.61
TRA2A-208ENST00000490942 PIK3CD-AS1Q5SR53 167 aa11.26□□□□□ -0.61
TRA2A-208ENST00000490942 MDFICQ9P1T7 246 aa11.26□□□□□ -0.61
TRA2A-208ENST00000490942 B4DEV8 164 aa11.25□□□□□ -0.61
TRA2A-208ENST00000490942 CEMP1Q6PRD7 247 aaPredicted RBP11.25□□□□□ -0.61
TRA2A-208ENST00000490942 Q6ZTC4 211 aa11.25□□□□□ -0.61
TRA2A-208ENST00000490942 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
TRA2A-208ENST00000490942 RASL10AQ92737 203 aa11.25□□□□□ -0.61
TRA2A-208ENST00000490942 FAM210BQ96KR6 192 aa11.25□□□□□ -0.61
TRA2A-208ENST00000490942 C9orf85Q96MD7 179 aa11.25□□□□□ -0.61
TRA2A-208ENST00000490942 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
TRA2A-208ENST00000490942 C19orf71A6NCJ1 209 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 ZNF727A8MUV8 499 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 M0R2P5 195 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 ASIPP42127 132 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 TCTAP57738 103 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 IL36BQ9NZH7 164 aa11.24□□□□□ -0.61
TRA2A-208ENST00000490942 KLK5Q9Y337 293 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-208ENST00000490942 ATP5G1P05496 136 aa11.23□□□□□ -0.61
TRA2A-208ENST00000490942 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
TRA2A-208ENST00000490942 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
TRA2A-208ENST00000490942 MGST1P10620 155 aaKnown RBP11.23□□□□□ -0.61
TRA2A-208ENST00000490942 RNASE3P12724 160 aaKnown RBP11.23□□□□□ -0.61
TRA2A-208ENST00000490942 RPS20P60866 119 aaKnown RBP11.23□□□□□ -0.61
TRA2A-208ENST00000490942 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
TRA2A-208ENST00000490942 OCC1Q8TAD7 63 aa11.23□□□□□ -0.61
TRA2A-208ENST00000490942 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
TRA2A-208ENST00000490942 DEFB131BA0A096LNP1 70 aa11.22□□□□□ -0.61
TRA2A-208ENST00000490942 TRGV1A0A0A0MS02 117 aa11.22□□□□□ -0.61
TRA2A-208ENST00000490942 M0R036 132 aa11.22□□□□□ -0.61
TRA2A-208ENST00000490942 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
TRA2A-208ENST00000490942 SRSF3P84103 164 aaKnown RBP11.22□□□□□ -0.61
TRA2A-208ENST00000490942 UQCC3Q6UW78 93 aa11.22□□□□□ -0.61
TRA2A-208ENST00000490942 Q6ZTI0 123 aa11.22□□□□□ -0.61
TRA2A-208ENST00000490942 DNAH7Q8WXX0 4024 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 XKRY2A2RUG3 117 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 PGPEP1LA6NFU8 196 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 C9JQL5 133 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 CIDEAO60543 219 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 P01737 135 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 CEBPGP53567 150 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 OR5I1Q13606 314 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 SOHLH1Q5JUK2 328 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 FAM231DQ6ZW35 169 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 ZNF575Q86XF7 245 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 SCRT2Q9NQ03 307 aa11.21□□□□□ -0.61
TRA2A-208ENST00000490942 TRGV2A0A075B6R0 118 aa11.2□□□□□ -0.62
TRA2A-208ENST00000490942 GAGE12BA1L429 117 aa11.2□□□□□ -0.62
TRA2A-208ENST00000490942 GAGE7O76087 117 aa11.2□□□□□ -0.62
TRA2A-208ENST00000490942 GAGE12FP0CL80 117 aa11.2□□□□□ -0.62
TRA2A-208ENST00000490942 GAGE12GP0CL81 117 aa11.2□□□□□ -0.62
TRA2A-208ENST00000490942 GAGE12IP0CL82 117 aa11.2□□□□□ -0.62
TRA2A-208ENST00000490942 TMEM241Q24JQ0 296 aa11.2□□□□□ -0.62
TRA2A-208ENST00000490942 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms