RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
VTI1A-206ENST00000489142 ARPC5O15511 151 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 NXPH4O95158 308 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 UBE2G2P60604 165 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 PRNTQ86SH4 94 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 RASL10AQ92737 203 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 SPXQ9BT56 116 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 NDFIP1Q9BT67 221 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 KRTAP17-1Q9BYP8 105 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 SDF2L1Q9HCN8 221 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 TMEM167BQ9NRX6 74 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 C11orf21Q9P2W6 132 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 PSG8Q9UQ74 426 aa9.63□□□□□ -0.87
VTI1A-206ENST00000489142 TRAV34A0A0B4J273 112 aa9.62□□□□□ -0.87
VTI1A-206ENST00000489142 GCGP01275 180 aa9.62□□□□□ -0.87
VTI1A-206ENST00000489142 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
VTI1A-206ENST00000489142 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
VTI1A-206ENST00000489142 LINC00479Q96M42 142 aa9.62□□□□□ -0.87
VTI1A-206ENST00000489142 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 K7EQD1 137 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 K7EQM0 130 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 M0R2P5 195 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 MED14OSP0DP75 135 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 GYPEP15421 78 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-206ENST00000489142 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 OR4C5Q8NGB2 326 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 CYTL1Q9NRR1 136 aa9.61□□□□□ -0.87
VTI1A-206ENST00000489142 DYNC1H1Q14204 4646 aaKnown RBP9.6□□□□□ -0.87
VTI1A-206ENST00000489142 TRAV4A0A0B4J268 109 aa9.6□□□□□ -0.87
VTI1A-206ENST00000489142 CTXND1A0A1B0GTU2 59 aa9.6□□□□□ -0.87
VTI1A-206ENST00000489142 SERTM2A0A1B0GWG4 89 aa9.6□□□□□ -0.87
VTI1A-206ENST00000489142 C9JCJ5 164 aa9.6□□□□□ -0.87
VTI1A-206ENST00000489142 SIVA1O15304 175 aa9.6□□□□□ -0.87
VTI1A-206ENST00000489142 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
VTI1A-206ENST00000489142 AKR1C8PQ5T2L2 129 aa9.6□□□□□ -0.87
VTI1A-206ENST00000489142 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
VTI1A-206ENST00000489142 DNAH11Q96DT5 4516 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 C16orf90A8MZG2 172 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 IFNA7P01567 189 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 SRIP30626 198 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 LINC00315P59091 139 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 SLAQ13239 276 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 ZFP69Q49AA0 526 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 SMUG1Q53HV7 270 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 NEGR1Q7Z3B1 354 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 PCNPQ8WW12 178 aaKnown RBP9.59□□□□□ -0.87
VTI1A-206ENST00000489142 KCNS1Q96KK3 526 aa9.59□□□□□ -0.87
VTI1A-206ENST00000489142 IGHV3-73A0A0B4J1V6 119 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 A0A1W2PPQ1 181 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 A0A1W2PRE2 83 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 MAP1LC3B2A6NCE7 125 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 TAAR5O14804 337 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 PFN1P07737 140 aaKnown RBP9.58□□□□□ -0.88
VTI1A-206ENST00000489142 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-206ENST00000489142 MAP1LC3BQ9GZQ8 125 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 TNFRSF18Q9Y5U5 241 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
VTI1A-206ENST00000489142 FAM74A7A6NL05 159 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 PEX7O00628 323 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 FHITP49789 147 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 ZNF876PQ49A33 203 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 DPPA3Q6W0C5 159 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 SPATA12Q7Z6I5 190 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 Q86TA4 180 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
VTI1A-206ENST00000489142 OR11H4Q8NGC9 324 aa9.56□□□□□ -0.88
VTI1A-206ENST00000489142 C9orf85Q96MD7 179 aa9.56□□□□□ -0.88
VTI1A-206ENST00000489142 A0A1B0GV50 99 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 PGPEP1LA6NFU8 196 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
VTI1A-206ENST00000489142 ORM1P02763 201 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
VTI1A-206ENST00000489142 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-206ENST00000489142 KRTAP10-2P60368 255 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 ZNF506Q5JVG8 444 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 SAPCD1Q5SSQ6 148 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 CFAP126Q5VTH2 177 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 Q6ZRN7 208 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-206ENST00000489142 NHLRC2Q8NBF2 726 aa9.55□□□□□ -0.88
VTI1A-206ENST00000489142 IGKV3D-20A0A0C4DH25 116 aa9.54□□□□□ -0.88
VTI1A-206ENST00000489142 RS1O15537 224 aa9.54□□□□□ -0.88
VTI1A-206ENST00000489142 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
VTI1A-206ENST00000489142 KCNRGQ8N5I3 272 aa9.54□□□□□ -0.88
VTI1A-206ENST00000489142 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
VTI1A-206ENST00000489142 ZC2HC1AQ96GY0 325 aa9.54□□□□□ -0.88
VTI1A-206ENST00000489142 TXNDC17Q9BRA2 123 aa9.54□□□□□ -0.88
VTI1A-206ENST00000489142 M0R036 132 aa9.53□□□□□ -0.88
VTI1A-206ENST00000489142 PPT1P50897 306 aa9.53□□□□□ -0.88
VTI1A-206ENST00000489142 CST9LP1Q5W188 147 aa9.53□□□□□ -0.88
VTI1A-206ENST00000489142 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
VTI1A-206ENST00000489142 H3BVH4 76 aa9.52□□□□□ -0.89
VTI1A-206ENST00000489142 S100A4P26447 101 aaKnown RBP9.52□□□□□ -0.89
VTI1A-206ENST00000489142 ZNF345Q14585 488 aa9.52□□□□□ -0.89
VTI1A-206ENST00000489142 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
VTI1A-206ENST00000489142 ZNF471Q9BX82 626 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-206ENST00000489142 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms