RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SMLR1H3BR10 107 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 M0R2P5 195 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 GCGP01275 180 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 S100A4P26447 101 aaKnown RBP6.36□□□□□ -1.39
HDAC6-232ENST00000489053 FGF8P55075 233 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-232ENST00000489053 UBE2G1P62253 170 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 MRPL23Q16540 153 aaKnown RBP6.36□□□□□ -1.39
HDAC6-232ENST00000489053 CST9LP1Q5W188 147 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 Q6ZQT7 251 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 C6orf223Q8N319 242 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 TMEM75Q8N9X5 138 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 ZNRF2Q8NHG8 242 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 ZNF471Q9BX82 626 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-232ENST00000489053 MAP1LC3BQ9GZQ8 125 aa6.36□□□□□ -1.39
HDAC6-232ENST00000489053 DNAH17Q9UFH2 4485 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 A0A0D9SG52 128 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 GGTLC3B5MD39 225 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 PEX7O00628 323 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 ORM1P02763 201 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 PFN1P07737 140 aaKnown RBP6.35□□□□□ -1.39
HDAC6-232ENST00000489053 TDRG1Q3Y452 100 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 Q6ZR54 194 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 NHLRC2Q8NBF2 726 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 HIST1H2BAQ96A08 127 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 TXNDC17Q9BRA2 123 aa6.35□□□□□ -1.39
HDAC6-232ENST00000489053 MRPS16Q9Y3D3 137 aaKnown RBP6.35□□□□□ -1.39
HDAC6-232ENST00000489053 TRAV9-2A0A087WT02 112 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 A0A096LPF7 62 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 TRAV4A0A0B4J268 109 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 IGHV3-16A0A0C4DH30 117 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 UMAD1C9J7I0 102 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 RTL8CO15255 209 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 BCL2L11O43521 198 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 GNRH2O43555 120 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 TYMSP04818 313 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 SFTA3P0C7M3 94 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 GYPEP15421 78 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 CRYBA4P53673 196 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 ZNF345Q14585 488 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 ESRGQ1W209 222 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 ZNF876PQ49A33 203 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 NEGR1Q7Z3B1 354 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 KCNRGQ8N5I3 272 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 FAM213BQ8TBF2 198 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 SUN5Q8TC36 379 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 SFT2D1Q8WV19 159 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 RASL10AQ92737 203 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 VSIG2Q96IQ7 327 aa6.34□□□□□ -1.39
HDAC6-232ENST00000489053 TRAV34A0A0B4J273 112 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 A0A1B0GV50 99 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 A0A1W2PPQ1 181 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 HMSDA8MTL9 139 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 SIVA1O15304 175 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 NXPH4O95158 308 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 TPT1P13693 172 aaKnown RBP6.33□□□□□ -1.4
HDAC6-232ENST00000489053 ASIPP42127 132 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 AKR1C3P42330 323 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 FHL2Q14192 279 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 EIF5AL1Q6IS14 154 aaKnown RBP6.33□□□□□ -1.4
HDAC6-232ENST00000489053 SH2D6Q7Z4S9 175 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 TVP23CQ96ET8 276 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 FMC1Q96HJ9 113 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 ZNF479Q96JC4 524 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 TCEAL7Q9BRU2 100 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 PRADC1Q9BSG0 188 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 UPK3BQ9BT76 320 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
HDAC6-232ENST00000489053 FAM74A7A6NL05 159 aa6.32□□□□□ -1.4
HDAC6-232ENST00000489053 FABP5P3A8MUU1 101 aa6.32□□□□□ -1.4
HDAC6-232ENST00000489053 TEX46H3BTG2 121 aa6.32□□□□□ -1.4
HDAC6-232ENST00000489053 ZNF726P1Q15940 193 aa6.32□□□□□ -1.4
HDAC6-232ENST00000489053 SYT8Q8NBV8 401 aa6.32□□□□□ -1.4
HDAC6-232ENST00000489053 ARL2-SNX15V9GYD0 113 aa6.32□□□□□ -1.4
HDAC6-232ENST00000489053 B4DEV8 164 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 K7EQD1 137 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 EREGO14944 169 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 CIDEAO60543 219 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 H2AFB1P0C5Y9 115 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 SEC11BP0C7V7 166 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 EVI2AP22794 236 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 FHITP49789 147 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 LGALSLQ3ZCW2 172 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-232ENST00000489053 FAM162BQ5T6X4 162 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 DPPA3Q6W0C5 159 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 Q86TA4 180 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 LINC00479Q96M42 142 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 CYTL1Q9NRR1 136 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 ZFP30Q9Y2G7 519 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 LY96Q9Y6Y9 160 aa6.31□□□□□ -1.4
HDAC6-232ENST00000489053 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
HDAC6-232ENST00000489053 G3V3Q6 166 aa6.3□□□□□ -1.4
HDAC6-232ENST00000489053 M0R036 132 aa6.3□□□□□ -1.4
HDAC6-232ENST00000489053 IGLV2-11P01706 119 aa6.3□□□□□ -1.4
HDAC6-232ENST00000489053 S100A9P06702 114 aaKnown RBP6.3□□□□□ -1.4
HDAC6-232ENST00000489053 BTF3P20290 206 aaKnown RBP6.3□□□□□ -1.4
HDAC6-232ENST00000489053 ZNF80P51504 273 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-232ENST00000489053 RHOHQ15669 191 aa6.3□□□□□ -1.4
HDAC6-232ENST00000489053 TMUB2Q71RG4 321 aa6.3□□□□□ -1.4
HDAC6-232ENST00000489053 TMSB15BA0A087X1C1 80 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms