RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 IGLV2-23P01705 113 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 IGHV3-64A0A075B6Q5 118 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 Q1RN00 199 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 NDUFA11Q86Y39 141 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 PIFOQ8TCI5 191 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 PRR25Q96S07 402 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 SRD5A1P18405 259 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 GAFA1Q96PS6 74 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 FOXC1Q12948 553 aa12.53□□□□□ -0.4
MCF2L-229ENST00000488765 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
MCF2L-229ENST00000488765 GATD1Q8NB37 220 aa12.53□□□□□ -0.4
MCF2L-229ENST00000488765 VMA21Q3ZAQ7 101 aa12.53□□□□□ -0.4
MCF2L-229ENST00000488765 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
MCF2L-229ENST00000488765 Q8N1Y9 231 aa12.53□□□□□ -0.4
MCF2L-229ENST00000488765 CACNA1AO00555 2505 aa12.53□□□□□ -0.4
MCF2L-229ENST00000488765 TMEM262E9PQX1 116 aa12.52□□□□□ -0.4
MCF2L-229ENST00000488765 CFC1BP0CG36 223 aa12.52□□□□□ -0.4
MCF2L-229ENST00000488765 CFC1P0CG37 223 aa12.52□□□□□ -0.4
MCF2L-229ENST00000488765 ZNF575Q86XF7 245 aa12.52□□□□□ -0.4
MCF2L-229ENST00000488765 KLK5Q9Y337 293 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-229ENST00000488765 HOXB4P17483 251 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-229ENST00000488765 RNF182Q8N6D2 247 aa12.52□□□□□ -0.41
MCF2L-229ENST00000488765 IGKV3-15P01624 115 aa12.52□□□□□ -0.41
MCF2L-229ENST00000488765 UBE2D3P61077 147 aa12.52□□□□□ -0.41
MCF2L-229ENST00000488765 UBE2D2P62837 147 aa12.52□□□□□ -0.41
MCF2L-229ENST00000488765 ZNF56Q15929 161 aa12.52□□□□□ -0.41
MCF2L-229ENST00000488765 ZNF833PQ6ZTB9 187 aa12.52□□□□□ -0.41
MCF2L-229ENST00000488765 F8VRH5 84 aa12.51□□□□□ -0.41
MCF2L-229ENST00000488765 H7C1H1 209 aa12.51□□□□□ -0.41
MCF2L-229ENST00000488765 Q8N8P6 123 aa12.51□□□□□ -0.41
MCF2L-229ENST00000488765 DKK4Q9UBT3 224 aa12.51□□□□□ -0.41
MCF2L-229ENST00000488765 PLNP26678 52 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 DUX3Q96PT4 197 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 BSNQ9UPA5 3926 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 PRAC2D3DTV9 90 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 CD7P09564 240 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 TCF15Q12870 199 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 SHANK2-AS3Q9BTD1 123 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 RNF7Q9UBF6 113 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 IGHV3-49A0A0A0MS15 119 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 GLRXP35754 106 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-229ENST00000488765 MRGPRG-AS1Q2M3A8 158 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 TMEM200BQ69YZ2 307 aa12.5□□□□□ -0.41
MCF2L-229ENST00000488765 SHISA9B4DS77 424 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 PF4V1P10720 104 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 UBE2D1P51668 147 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 CFHR4Q92496 578 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 DCHS2Q6V1P9 2916 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 RASL10AQ92737 203 aa12.49□□□□□ -0.41
MCF2L-229ENST00000488765 OOSP1A8MZH6 123 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-229ENST00000488765 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 C21orf62Q9NYP8 219 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 IGLV2-18A0A075B6J9 118 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 TRAV8-4A0A0B4J246 113 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 FAM57AQ8TBR7 257 aa12.48□□□□□ -0.41
MCF2L-229ENST00000488765 RPL39LQ96EH5 51 aaKnown RBP12.48□□□□□ -0.41
MCF2L-229ENST00000488765 COL27A1Q8IZC6 1860 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-229ENST00000488765 IGLC6P0CF74 106 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 CCL17Q92583 94 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 CENPEQ02224 2701 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 FCN3O75636 299 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 TMEM170BQ5T4T1 132 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-229ENST00000488765 M0R381 172 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 LHBP01229 141 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 PRR30Q53SZ7 412 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-229ENST00000488765 LYPD2Q6UXB3 125 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 C11orf21Q9P2W6 132 aa12.47□□□□□ -0.41
MCF2L-229ENST00000488765 TRAV2A0A0B4J234 112 aa12.46□□□□□ -0.41
MCF2L-229ENST00000488765 MRPS12O15235 138 aaKnown RBP12.46□□□□□ -0.41
MCF2L-229ENST00000488765 ZFHX3Q15911 3703 aa12.46□□□□□ -0.41
MCF2L-229ENST00000488765 NPC2P61916 151 aa12.46□□□□□ -0.42
MCF2L-229ENST00000488765 DYNAPQ8N1N2 210 aa12.46□□□□□ -0.42
MCF2L-229ENST00000488765 IGHG3P01860 377 aa12.45□□□□□ -0.42
MCF2L-229ENST00000488765 PRSS33Q8NF86 280 aa12.45□□□□□ -0.42
MCF2L-229ENST00000488765 VCX2Q9H322 139 aa12.45□□□□□ -0.42
MCF2L-229ENST00000488765 PRO1854Q9UHT4 67 aa12.45□□□□□ -0.42
MCF2L-229ENST00000488765 A4D1N5 150 aa12.45□□□□□ -0.42
MCF2L-229ENST00000488765 COX7A1P24310 79 aa12.45□□□□□ -0.42
MCF2L-229ENST00000488765 CEMP1Q6PRD7 247 aaPredicted RBP12.45□□□□□ -0.42
MCF2L-229ENST00000488765 C10orf126Q8N4M7 172 aa12.45□□□□□ -0.42
MCF2L-229ENST00000488765 RAI1Q7Z5J4 1906 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-229ENST00000488765 H3BRN7 92 aa12.44□□□□□ -0.42
MCF2L-229ENST00000488765 CENPVL3A0A0U1RRI6 287 aa12.44□□□□□ -0.42
MCF2L-229ENST00000488765 ADARB2-AS1A8MUL3 147 aa12.44□□□□□ -0.42
MCF2L-229ENST00000488765 TSPEAR-AS2P59090 65 aa12.44□□□□□ -0.42
MCF2L-229ENST00000488765 NRACQ8N912 160 aa12.44□□□□□ -0.42
MCF2L-229ENST00000488765 FAM215AQ9Y5M1 114 aa12.44□□□□□ -0.42
MCF2L-229ENST00000488765 IGKV3D-20A0A0C4DH25 116 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms