RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RIGQ13278 110 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 LINC00482Q8N8I6 264 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 CITED1Q99966 193 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 TPPP3Q9BW30 176 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 SSBP4Q9BWG4 385 aaPredicted RBP7□□□□□ -1.29
SF3B1-211ENST00000487698 HLA-DRB4X5D2U9 266 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 SAP30O75446 220 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 ODF3L2Q3SX64 289 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 MAST4O15021 2626 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 C7orf71A4D174 169 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 KNCNA6PVL3 124 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 H3BMM0 161 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 S100A8P05109 93 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 KIAA1644Q3SXP7 199 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 GFI1BQ5VTD9 330 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 ZNF493Q6ZR52 646 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 OR2K2Q8NGT1 345 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 BORCS7Q96B45 105 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 VWFP04275 2813 aa6.99□□□□□ -1.29
SF3B1-211ENST00000487698 IFITM10A6NMD0 228 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 F2Z2F3 143 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 M0R2Z0 102 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 SNAI2O43623 268 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 ZNF324O75467 553 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-211ENST00000487698 CDKN1BP46527 198 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 ZNF124Q15973 351 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 DNLZQ5SXM8 178 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 HIST3H2BBQ8N257 126 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 RBMY1BA6NDE4 496 aaKnown RBP6.98□□□□□ -1.29
SF3B1-211ENST00000487698 RBMY1EA6NEQ0 496 aaKnown RBP6.98□□□□□ -1.29
SF3B1-211ENST00000487698 IGKV3-20P01619 116 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 PF4P02776 101 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 OR5AL1P0C617 328 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 RBMY1DP0C7P1 496 aaKnown RBP6.98□□□□□ -1.29
SF3B1-211ENST00000487698 TSPOP30536 169 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 SRIP30626 198 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 Q0VG73 95 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 ANXA2RQ3ZCQ2 193 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 PRR31Q5SQ13 230 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 TP53TG3Q9ULZ0 132 aa6.98□□□□□ -1.29
SF3B1-211ENST00000487698 LOC102724200A0A096LPH7 203 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-211ENST00000487698 MUC21A0A0G2JKD1 596 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 MUC21A0A140T8X8 626 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 MUC21Q5SSG8 566 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 NAGKQ9UJ70 344 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 IGHV4-4A0A075B6R2 117 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 TRAV12-3A0A0B4J271 114 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 MED14OSP0DP75 135 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 NTF3P20783 257 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 LINC00310P59036 64 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 OR10J3Q5JRS4 329 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 OR10AG1Q8NH19 301 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 ALKBH7Q9BT30 221 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-211ENST00000487698 MSRB1Q9NZV6 116 aa6.97□□□□□ -1.29
SF3B1-211ENST00000487698 MUC4Q99102 2169 aa6.96□□□□□ -1.29
SF3B1-211ENST00000487698 H3BVH4 76 aa6.96□□□□□ -1.3
SF3B1-211ENST00000487698 CRXO43186 299 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-211ENST00000487698 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.3
SF3B1-211ENST00000487698 DMRTA1Q5VZB9 504 aa6.96□□□□□ -1.3
SF3B1-211ENST00000487698 TMEM256Q8N2U0 113 aa6.96□□□□□ -1.3
SF3B1-211ENST00000487698 FAM110AQ9BQ89 295 aa6.96□□□□□ -1.3
SF3B1-211ENST00000487698 SCRT2Q9NQ03 307 aa6.96□□□□□ -1.3
SF3B1-211ENST00000487698 OR11H12B2RN74 326 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 ASIPP42127 132 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 TWIST1Q15672 202 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 KCNS1Q96KK3 526 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 TMEM191AQ9H0A3 160 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 GNRH2O43555 120 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 RBMY1A1P0DJD3 496 aaKnown RBP6.95□□□□□ -1.3
SF3B1-211ENST00000487698 RBMY1CP0DJD4 496 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 ESDP10768 282 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 RNASE3P12724 160 aaKnown RBP6.95□□□□□ -1.3
SF3B1-211ENST00000487698 CACNG7P62955 275 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 RBMY1FQ15415 496 aaKnown RBP6.95□□□□□ -1.3
SF3B1-211ENST00000487698 KRTAP24-1Q3LI83 254 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 PDZD11Q5EBL8 140 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 FAM104BQ5XKR9 115 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 FAM159AQ6UWV7 190 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 SPATA3Q8NHX4 192 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 HIST1H2BLQ99880 126 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 NOTCH3Q9UM47 2321 aa6.95□□□□□ -1.3
SF3B1-211ENST00000487698 NUPR1O60356 82 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 SERF1AO75920 110 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 AKR1D1P51857 326 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
SF3B1-211ENST00000487698 SSTP61278 116 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 TRPT1Q86TN4 253 aaKnown RBP6.94□□□□□ -1.3
SF3B1-211ENST00000487698 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 IGHV1OR15-1A0A075B7D0 117 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 NXPH4O95158 308 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 FXYD7P58549 80 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 AMN1Q8IY45 258 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 RCHY1Q96PM5 261 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 U3KQK5 164 aa6.94□□□□□ -1.3
SF3B1-211ENST00000487698 AMBPP02760 352 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms