RNA–Protein interactions for RNA: ENST00000487279.6

IFFO1-209, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 2,786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-209ENST00000487279 LYNX1G3V0Z9 82 aa12.7□□□□□ -0.38
IFFO1-209ENST00000487279 LYNX1P0DP58 116 aa12.7□□□□□ -0.38
IFFO1-209ENST00000487279 TCF15Q12870 199 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 LINC01559Q495D7 138 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 ATP6V0E2Q8NHE4 81 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 ONECUT1Q9UBC0 465 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 ATRXP46100 2492 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 B5MCH6 92 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 SCGB3A1Q96QR1 104 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 RALYQ9UKM9 306 aaKnown RBP12.69□□□□□ -0.38
IFFO1-209ENST00000487279 ZFHX3Q15911 3703 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 SLC25A16P16260 332 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 Q6ZS92 163 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 FANCD2OSQ96PS1 177 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 MED13LQ71F56 2210 aa12.69□□□□□ -0.38
IFFO1-209ENST00000487279 TCL1BO95988 128 aa12.68□□□□□ -0.38
IFFO1-209ENST00000487279 EMP1P54849 157 aa12.68□□□□□ -0.38
IFFO1-209ENST00000487279 MFAP4P55083 255 aa12.68□□□□□ -0.38
IFFO1-209ENST00000487279 IGF2RP11717 2491 aa12.68□□□□□ -0.38
IFFO1-209ENST00000487279 PRR30Q53SZ7 412 aaPredicted RBP12.68□□□□□ -0.38
IFFO1-209ENST00000487279 PPDPFLQ8WWR9 84 aa12.68□□□□□ -0.38
IFFO1-209ENST00000487279 SPANXN1Q5VSR9 72 aa12.67□□□□□ -0.38
IFFO1-209ENST00000487279 TEN1Q86WV5 123 aa12.67□□□□□ -0.38
IFFO1-209ENST00000487279 RAB1BQ9H0U4 201 aa12.67□□□□□ -0.38
IFFO1-209ENST00000487279 ABCA4P78363 2273 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 HES1Q14469 280 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 NUP37Q8NFH4 326 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 TMEM190Q8WZ59 177 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 C21orf62Q9NYP8 219 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 J3KRW8 73 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 C5orf64Q2M2E5 130 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 ASCL5Q7RTU5 278 aa12.66□□□□□ -0.38
IFFO1-209ENST00000487279 UBE2D1P51668 147 aa12.65□□□□□ -0.38
IFFO1-209ENST00000487279 IGHV7-4-1A0A0J9YVY3 117 aa12.65□□□□□ -0.38
IFFO1-209ENST00000487279 C3orf36Q3SXR2 165 aa12.65□□□□□ -0.38
IFFO1-209ENST00000487279 ANKRD29Q8N6D5 301 aa12.65□□□□□ -0.38
IFFO1-209ENST00000487279 IGHV3-49A0A0A0MS15 119 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 A6NJY4 79 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 PRTN3P24158 256 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 UBE2D3P61077 147 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 UBE2D2P62837 147 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 IGFL3Q6UXB1 125 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 DYNLRB1Q9NP97 96 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 Q9UFV3 132 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 VPS13CQ709C8 3753 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 IGLV11-55A0A075B6I3 123 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 NBR2O15453 112 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 NEXN-AS1Q8NBZ9 246 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 RASL10AQ92737 203 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
IFFO1-209ENST00000487279 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 AGPAT4-IT1Q9H0P7 198 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 CD7P09564 240 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 NDPQ00604 133 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 ZFAND6Q6FIF0 208 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 TEX29Q8N6K0 151 aa12.64□□□□□ -0.39
IFFO1-209ENST00000487279 TRBV20-1A0A075B6N2 111 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 TRAV12-1A0A0B4J245 112 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 LINC01619G3V211 115 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 CTSGP08311 255 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 SCGB1C2P0DMR2 95 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 A8MWV9 139 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 SRSF2Q01130 221 aaKnown RBP12.63□□□□□ -0.39
IFFO1-209ENST00000487279 ZNF672Q499Z4 452 aaPredicted RBP12.63□□□□□ -0.39
IFFO1-209ENST00000487279 NDUFA11Q86Y39 141 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 BAALCQ8WXS3 180 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 RNASE6Q93091 150 aaKnown RBP12.63□□□□□ -0.39
IFFO1-209ENST00000487279 PTPRQQ9UMZ3 2332 aa12.63□□□□□ -0.39
IFFO1-209ENST00000487279 GAGE5Q13069 117 aa12.62□□□□□ -0.39
IFFO1-209ENST00000487279 GAGE6Q13070 117 aa12.62□□□□□ -0.39
IFFO1-209ENST00000487279 FAM57AQ8TBR7 257 aa12.62□□□□□ -0.39
IFFO1-209ENST00000487279 KAAG1Q9UBP8 84 aa12.62□□□□□ -0.39
IFFO1-209ENST00000487279 M0R381 172 aa12.62□□□□□ -0.39
IFFO1-209ENST00000487279 Q6ZS46 218 aa12.62□□□□□ -0.39
IFFO1-209ENST00000487279 HRNRQ86YZ3 2850 aaPredicted RBP12.61□□□□□ -0.39
IFFO1-209ENST00000487279 NHLRC4P0CG21 123 aaPredicted RBP12.61□□□□□ -0.39
IFFO1-209ENST00000487279 CRIP2P52943 208 aaPredicted RBP12.61□□□□□ -0.39
IFFO1-209ENST00000487279 C2orf66Q6UXQ4 117 aa12.61□□□□□ -0.39
IFFO1-209ENST00000487279 AJUBAQ96IF1 538 aa12.61□□□□□ -0.39
IFFO1-209ENST00000487279 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
IFFO1-209ENST00000487279 IGF2-ASQ6U949 168 aa12.6□□□□□ -0.39
IFFO1-209ENST00000487279 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
IFFO1-209ENST00000487279 COX6B1P14854 86 aa12.6□□□□□ -0.39
IFFO1-209ENST00000487279 OR11H6Q8NGC7 330 aa12.6□□□□□ -0.39
IFFO1-209ENST00000487279 RAX2Q96IS3 184 aa12.6□□□□□ -0.39
IFFO1-209ENST00000487279 MSRB2Q9Y3D2 182 aa12.6□□□□□ -0.39
IFFO1-209ENST00000487279 H7C2G1 150 aa12.59□□□□□ -0.39
IFFO1-209ENST00000487279 CFC1BP0CG36 223 aa12.59□□□□□ -0.39
IFFO1-209ENST00000487279 CFC1P0CG37 223 aa12.59□□□□□ -0.39
IFFO1-209ENST00000487279 SUMO2P61956 95 aaKnown RBP12.59□□□□□ -0.39
IFFO1-209ENST00000487279 HIF1ANQ9NWT6 349 aa12.59□□□□□ -0.39
IFFO1-209ENST00000487279 MAP1AP78559 2803 aaPredicted RBP12.59□□□□□ -0.39
IFFO1-209ENST00000487279 LY6LH3BQJ8 138 aa12.59□□□□□ -0.39
IFFO1-209ENST00000487279 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
IFFO1-209ENST00000487279 CRLF1O75462 422 aa12.58□□□□□ -0.39
IFFO1-209ENST00000487279 Q8NA96 180 aa12.58□□□□□ -0.39
IFFO1-209ENST00000487279 TRAV8-2A0A0B4J237 113 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms