RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 EPDR1Q9UM22 224 aa10.96□□□□□ -0.65
GABPA-203ENST00000487266 PSG8Q9UQ74 426 aa10.96□□□□□ -0.65
GABPA-203ENST00000487266 TRAV34A0A0B4J273 112 aa10.95□□□□□ -0.66
GABPA-203ENST00000487266 FHITP49789 147 aa10.95□□□□□ -0.66
GABPA-203ENST00000487266 FHL2Q14192 279 aa10.95□□□□□ -0.66
GABPA-203ENST00000487266 CYB561D1Q8N8Q1 229 aa10.95□□□□□ -0.66
GABPA-203ENST00000487266 ZNF479Q96JC4 524 aa10.95□□□□□ -0.66
GABPA-203ENST00000487266 NDFIP1Q9BT67 221 aa10.95□□□□□ -0.66
GABPA-203ENST00000487266 C11orf21Q9P2W6 132 aa10.95□□□□□ -0.66
GABPA-203ENST00000487266 SERTM2A0A1B0GWG4 89 aa10.94□□□□□ -0.66
GABPA-203ENST00000487266 A0A1W2PRE2 83 aa10.94□□□□□ -0.66
GABPA-203ENST00000487266 TAAR5O14804 337 aa10.94□□□□□ -0.66
GABPA-203ENST00000487266 PAX4O43316 350 aa10.94□□□□□ -0.66
GABPA-203ENST00000487266 GCGP01275 180 aa10.94□□□□□ -0.66
GABPA-203ENST00000487266 FLI1Q01543 452 aaPredicted RBP10.94□□□□□ -0.66
GABPA-203ENST00000487266 Q9H8V8 135 aa10.94□□□□□ -0.66
GABPA-203ENST00000487266 MAP1LC3B2A6NCE7 125 aa10.93□□□□□ -0.66
GABPA-203ENST00000487266 CRYBA4P53673 196 aa10.93□□□□□ -0.66
GABPA-203ENST00000487266 KCNRGQ8N5I3 272 aa10.93□□□□□ -0.66
GABPA-203ENST00000487266 RASL10AQ92737 203 aa10.93□□□□□ -0.66
GABPA-203ENST00000487266 MAP1LC3BQ9GZQ8 125 aa10.93□□□□□ -0.66
GABPA-203ENST00000487266 SDF2L1Q9HCN8 221 aa10.93□□□□□ -0.66
GABPA-203ENST00000487266 MRPS16Q9Y3D3 137 aaKnown RBP10.93□□□□□ -0.66
GABPA-203ENST00000487266 FAM74A7A6NL05 159 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 K7EQM0 130 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 ZNF345Q14585 488 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 SPXQ9BT56 116 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 UPK3BQ9BT76 320 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 HHLA3Q9XRX5 114 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 ARL2-SNX15V9GYD0 113 aa10.92□□□□□ -0.66
GABPA-203ENST00000487266 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
GABPA-203ENST00000487266 PEX7O00628 323 aa10.91□□□□□ -0.66
GABPA-203ENST00000487266 IFNA7P01567 189 aa10.91□□□□□ -0.66
GABPA-203ENST00000487266 TNP2Q05952 138 aa10.91□□□□□ -0.66
GABPA-203ENST00000487266 SOHLH1Q5JUK2 328 aa10.91□□□□□ -0.66
GABPA-203ENST00000487266 C6orf223Q8N319 242 aa10.91□□□□□ -0.66
GABPA-203ENST00000487266 ICOSQ9Y6W8 199 aa10.91□□□□□ -0.66
GABPA-203ENST00000487266 A0A1B0GV50 99 aa10.9□□□□□ -0.66
GABPA-203ENST00000487266 M0R2P5 195 aa10.9□□□□□ -0.66
GABPA-203ENST00000487266 PFN1P07737 140 aaKnown RBP10.9□□□□□ -0.66
GABPA-203ENST00000487266 ZFP69Q49AA0 526 aa10.9□□□□□ -0.66
GABPA-203ENST00000487266 SMUG1Q53HV7 270 aa10.9□□□□□ -0.66
GABPA-203ENST00000487266 Q86TA4 180 aa10.9□□□□□ -0.66
GABPA-203ENST00000487266 TRAV4A0A0B4J268 109 aa10.89□□□□□ -0.67
GABPA-203ENST00000487266 C9JCJ5 164 aa10.89□□□□□ -0.67
GABPA-203ENST00000487266 BCL2L11O43521 198 aa10.89□□□□□ -0.67
GABPA-203ENST00000487266 KCNS1Q96KK3 526 aa10.89□□□□□ -0.67
GABPA-203ENST00000487266 ZNF471Q9BX82 626 aaPredicted RBP10.89□□□□□ -0.67
GABPA-203ENST00000487266 LOC100131303A0A0U1RQF7 123 aa10.88□□□□□ -0.67
GABPA-203ENST00000487266 HMSDA8MTL9 139 aa10.88□□□□□ -0.67
GABPA-203ENST00000487266 K7EQD1 137 aa10.88□□□□□ -0.67
GABPA-203ENST00000487266 DPPA3Q6W0C5 159 aa10.88□□□□□ -0.67
GABPA-203ENST00000487266 OR4C5Q8NGB2 326 aa10.88□□□□□ -0.67
GABPA-203ENST00000487266 IGKV3D-20A0A0C4DH25 116 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 KANTRA0A1W2PQU2 76 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 NXPH4O95158 308 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 RNASE3P12724 160 aaKnown RBP10.87□□□□□ -0.67
GABPA-203ENST00000487266 GYPEP15421 78 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 SAPCD1Q5SSQ6 148 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 ZNF575Q86XF7 245 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 FAM213BQ8TBF2 198 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
GABPA-203ENST00000487266 A0A0D9SG52 128 aa10.86□□□□□ -0.67
GABPA-203ENST00000487266 SRIP30626 198 aa10.86□□□□□ -0.67
GABPA-203ENST00000487266 SLAQ13239 276 aa10.86□□□□□ -0.67
GABPA-203ENST00000487266 MRPL23Q16540 153 aaKnown RBP10.86□□□□□ -0.67
GABPA-203ENST00000487266 ZNF876PQ49A33 203 aa10.86□□□□□ -0.67
GABPA-203ENST00000487266 CST9LP1Q5W188 147 aa10.86□□□□□ -0.67
GABPA-203ENST00000487266 LYPD5Q6UWN5 251 aa10.86□□□□□ -0.67
GABPA-203ENST00000487266 ZC2HC1AQ96GY0 325 aa10.86□□□□□ -0.67
GABPA-203ENST00000487266 IGHV3-73A0A0B4J1V6 119 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 PGPEP1LA6NFU8 196 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 FBLL1A6NHQ2 334 aaKnown RBP10.85□□□□□ -0.67
GABPA-203ENST00000487266 SEC11BP0C7V7 166 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 PPT1P50897 306 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 TTC32Q5I0X7 151 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 TMUB2Q71RG4 321 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 SFT2D1Q8WV19 159 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 PCNPQ8WW12 178 aaKnown RBP10.85□□□□□ -0.67
GABPA-203ENST00000487266 HIST1H2BAQ96A08 127 aa10.85□□□□□ -0.67
GABPA-203ENST00000487266 LRP1BQ9NZR2 4599 aa10.84□□□□□ -0.67
GABPA-203ENST00000487266 SIVA1O15304 175 aa10.84□□□□□ -0.67
GABPA-203ENST00000487266 PAGE4O60829 102 aa10.84□□□□□ -0.67
GABPA-203ENST00000487266 CRIP1P50238 77 aa10.84□□□□□ -0.67
GABPA-203ENST00000487266 CFAP126Q5VTH2 177 aa10.84□□□□□ -0.67
GABPA-203ENST00000487266 STOML3Q8TAV4 291 aa10.84□□□□□ -0.67
GABPA-203ENST00000487266 NKX6-2Q9C056 277 aaPredicted RBP10.84□□□□□ -0.67
GABPA-203ENST00000487266 M0R036 132 aa10.83□□□□□ -0.68
GABPA-203ENST00000487266 PFDN1O60925 122 aa10.83□□□□□ -0.68
GABPA-203ENST00000487266 GATA1P15976 413 aaPredicted RBP10.83□□□□□ -0.68
GABPA-203ENST00000487266 LINC00315P59091 139 aa10.83□□□□□ -0.68
GABPA-203ENST00000487266 WFDC10BQ8IUB3 73 aa10.83□□□□□ -0.68
GABPA-203ENST00000487266 NHLRC2Q8NBF2 726 aa10.83□□□□□ -0.68
GABPA-203ENST00000487266 DNAH5Q8TE73 4624 aa10.82□□□□□ -0.68
GABPA-203ENST00000487266 A0A1W2PPQ1 181 aa10.82□□□□□ -0.68
GABPA-203ENST00000487266 UMAD1C9J7I0 102 aa10.82□□□□□ -0.68
GABPA-203ENST00000487266 H3BVH4 76 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms