RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 TYMSP04818 313 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 CXCL1P09341 107 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 RPL19P84098 196 aaKnown RBP6.91□□□□□ -1.3
MCF2L-227ENST00000486806 IBA57Q5T440 356 aaKnown RBP6.91□□□□□ -1.3
MCF2L-227ENST00000486806 FAM159AQ6UWV7 190 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 Q8NAQ8 132 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 NUDT10Q8NFP7 164 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 RNASE8Q8TDE3 154 aaKnown RBP6.91□□□□□ -1.3
MCF2L-227ENST00000486806 NUDT11Q96G61 164 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 SFRP2Q96HF1 295 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 LINC01587Q99440 93 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 TMEM208Q9BTX3 173 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 RPP21Q9H633 154 aaKnown RBP6.91□□□□□ -1.3
MCF2L-227ENST00000486806 OSTCQ9NRP0 149 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 NAGKQ9UJ70 344 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 PLAC8L1A1L4L8 177 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 SMIM9A6NGZ8 99 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 ZNF705GA8MUZ8 300 aaPredicted RBP6.9□□□□□ -1.3
MCF2L-227ENST00000486806 B4DEV8 164 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 M0R036 132 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 ORM1P02763 201 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 PRM2P04554 102 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 AZU1P20160 251 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 ERVFC1-1P60608 527 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 CT83Q5H943 113 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 C11orf72Q8NBR9 251 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 OR11H2Q8NH07 326 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
MCF2L-227ENST00000486806 DAZAP1Q96EP5 407 aaKnown RBP6.9□□□□□ -1.3
MCF2L-227ENST00000486806 KCNS1Q96KK3 526 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 TP53TG3Q9ULZ0 132 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 V9GYV3 84 aa6.9□□□□□ -1.3
MCF2L-227ENST00000486806 FBN3Q75N90 2809 aa6.9□□□□□ -1.31
MCF2L-227ENST00000486806 TRGV11A0A075B6L2 103 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 IGHV3-16A0A0C4DH30 117 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 TMEM189A5PLL7 270 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 CBY3A6NI87 242 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 MIFP14174 115 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 RRN3P1Q2M238 152 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 DNLZQ5SXM8 178 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 OR2D3Q8NGH3 330 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 C16orf74Q96GX8 76 aa6.89□□□□□ -1.31
MCF2L-227ENST00000486806 TMSB15BA0A087X1C1 80 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 IGHV4-28A0A0C4DH34 117 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 GNRH2O43555 120 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
MCF2L-227ENST00000486806 APOC3P02656 99 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 IGLC6P0CF74 106 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
MCF2L-227ENST00000486806 HTN1P15515 57 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
MCF2L-227ENST00000486806 RHEBQ15382 184 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 RNF212Q495C1 297 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 ZNF493Q6ZR52 646 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 SVBPQ8N300 66 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 C15orf54Q8N8G6 183 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 CLRN3Q8NCR9 226 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 OR10G8Q8NGN5 311 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 C9orf85Q96MD7 179 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 C11orf68Q9H3H3 251 aaKnown RBP6.88□□□□□ -1.31
MCF2L-227ENST00000486806 MDFICQ9P1T7 246 aa6.88□□□□□ -1.31
MCF2L-227ENST00000486806 XKRY2A2RUG3 117 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 GRIFINA4D1Z8 144 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 SNAI2O43623 268 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 MED14OSP0DP75 135 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 GZMBP10144 247 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 ASIPP42127 132 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 TCL1AP56279 114 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 ZNF415Q09FC8 603 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 TSKUQ8WUA8 353 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 GTSF1Q8WW33 167 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 ANAPC16Q96DE5 110 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 ZMAT4Q9H898 229 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 SCRT2Q9NQ03 307 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 GSN-AS1Q9NRJ2 163 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 IL36BQ9NZH7 164 aa6.87□□□□□ -1.31
MCF2L-227ENST00000486806 A0A087WWC5 75 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 FAM231BA6NCW3 169 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 H3BVH4 76 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 PPP1R2P9O14990 202 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 ATP6V1G1O75348 118 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 SNAPINO95295 136 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 MT-ND4LP03901 98 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 OR5AL1P0C617 328 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 NHLRC4P0CG21 123 aaPredicted RBP6.86□□□□□ -1.31
MCF2L-227ENST00000486806 CTRLP40313 264 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 DAZ2Q13117 558 aaKnown RBP6.86□□□□□ -1.31
MCF2L-227ENST00000486806 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
MCF2L-227ENST00000486806 GFRA4Q9GZZ7 299 aa6.86□□□□□ -1.31
MCF2L-227ENST00000486806 A0A1W2PPQ1 181 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 SMIM27A0A1W2PRY6 76 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 C7orf77A4D0Y5 90 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 A8MWL6 223 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 NXPH4O95158 308 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 ARMS2P0C7Q2 107 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 S100A4P26447 101 aaKnown RBP6.85□□□□□ -1.31
MCF2L-227ENST00000486806 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
MCF2L-227ENST00000486806 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
MCF2L-227ENST00000486806 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms