RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, human

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-215	ENST00000485883	SPINK4	O60575	86 aa		13.91	□□□□□ -0.18
CHRD-215	ENST00000485883	FAM159A	Q6UWV7	190 aa		13.91	□□□□□ -0.18
CHRD-215	ENST00000485883	NDFIP1	Q9BT67	221 aa		13.91	□□□□□ -0.18
CHRD-215	ENST00000485883	HERC1	Q15751	4861 aa		13.9	□□□□□ -0.18
CHRD-215	ENST00000485883	TRAV8-1	A0A0A6YYK1	113 aa		13.9	□□□□□ -0.18
CHRD-215	ENST00000485883	CTXND1	A0A1B0GTU2	59 aa		13.9	□□□□□ -0.18
CHRD-215	ENST00000485883	SMLR1	H3BR10	107 aa		13.9	□□□□□ -0.18
CHRD-215	ENST00000485883	SIVA1	O15304	175 aa		13.9	□□□□□ -0.18
CHRD-215	ENST00000485883	TREM1	Q9NP99	234 aa		13.9	□□□□□ -0.18
CHRD-215	ENST00000485883	TRGV11	A0A075B6L2	103 aa		13.89	□□□□□ -0.19
CHRD-215	ENST00000485883	TRAV21	A0A0B4J279	112 aa		13.89	□□□□□ -0.19
CHRD-215	ENST00000485883	PAX4	O43316	350 aa		13.89	□□□□□ -0.19
CHRD-215	ENST00000485883	NXPH4	O95158	308 aa		13.89	□□□□□ -0.19
CHRD-215	ENST00000485883	TCRA	P04437	139 aa		13.89	□□□□□ -0.19
CHRD-215	ENST00000485883	MRPL16	Q9NX20	251 aa	Known RBP	13.89	□□□□□ -0.19
CHRD-215	ENST00000485883	NAGK	Q9UJ70	344 aa		13.89	□□□□□ -0.19
CHRD-215	ENST00000485883	GGTLC3	B5MD39	225 aa		13.88	□□□□□ -0.19
CHRD-215	ENST00000485883		F6UZH7	168 aa		13.88	□□□□□ -0.19
CHRD-215	ENST00000485883	SUMO1	P63165	101 aa	Known RBP	13.88	□□□□□ -0.19
CHRD-215	ENST00000485883	TMEM183B	Q1AE95	376 aa		13.88	□□□□□ -0.19
CHRD-215	ENST00000485883	TMEM183A	Q8IXX5	376 aa		13.88	□□□□□ -0.19
CHRD-215	ENST00000485883	CYTL1	Q9NRR1	136 aa		13.88	□□□□□ -0.19
CHRD-215	ENST00000485883	ICOS	Q9Y6W8	199 aa		13.88	□□□□□ -0.19
CHRD-215	ENST00000485883		A0A1W2PRE2	83 aa		13.87	□□□□□ -0.19
CHRD-215	ENST00000485883	ZNF345	Q14585	488 aa		13.87	□□□□□ -0.19
CHRD-215	ENST00000485883	ZNF726P1	Q15940	193 aa		13.87	□□□□□ -0.19
CHRD-215	ENST00000485883	KCNRG	Q8N5I3	272 aa		13.87	□□□□□ -0.19
CHRD-215	ENST00000485883	EPDR1	Q9UM22	224 aa		13.87	□□□□□ -0.19
CHRD-215	ENST00000485883	TDRG1	Q3Y452	100 aa		13.86	□□□□□ -0.19
CHRD-215	ENST00000485883	CYB561D1	Q8N8Q1	229 aa		13.86	□□□□□ -0.19
CHRD-215	ENST00000485883	TVP23C	Q96ET8	276 aa		13.86	□□□□□ -0.19
CHRD-215	ENST00000485883	SGK494	Q96LW2	274 aa		13.86	□□□□□ -0.19
CHRD-215	ENST00000485883	SPX	Q9BT56	116 aa		13.86	□□□□□ -0.19
CHRD-215	ENST00000485883	MDFIC	Q9P1T7	246 aa		13.86	□□□□□ -0.19
CHRD-215	ENST00000485883	FBLL1	A6NHQ2	334 aa	Known RBP	13.85	□□□□□ -0.19
CHRD-215	ENST00000485883	CRYBA4	P53673	196 aa		13.85	□□□□□ -0.19
CHRD-215	ENST00000485883	FHL2	Q14192	279 aa		13.85	□□□□□ -0.19
CHRD-215	ENST00000485883	LYPD5	Q6UWN5	251 aa		13.85	□□□□□ -0.19
CHRD-215	ENST00000485883	C8orf49	Q96NF6	230 aa		13.85	□□□□□ -0.19
CHRD-215	ENST00000485883	PRO0255	Q9UI72	69 aa		13.85	□□□□□ -0.19
CHRD-215	ENST00000485883	PSG8	Q9UQ74	426 aa		13.85	□□□□□ -0.19
CHRD-215	ENST00000485883	HMSD	A8MTL9	139 aa		13.84	□□□□□ -0.19
CHRD-215	ENST00000485883	FLI1	Q01543	452 aa	Predicted RBP	13.84	□□□□□ -0.19
CHRD-215	ENST00000485883	ZFP69	Q49AA0	526 aa		13.84	□□□□□ -0.19
CHRD-215	ENST00000485883	TMEM75	Q8N9X5	138 aa		13.84	□□□□□ -0.19
CHRD-215	ENST00000485883	KCNS1	Q96KK3	526 aa		13.84	□□□□□ -0.19
CHRD-215	ENST00000485883	HHLA3	Q9XRX5	114 aa		13.84	□□□□□ -0.19
CHRD-215	ENST00000485883		A0A0D9SG52	128 aa		13.83	□□□□□ -0.2
CHRD-215	ENST00000485883	MAP1LC3B2	A6NCE7	125 aa		13.83	□□□□□ -0.2
CHRD-215	ENST00000485883	IFNA7	P01567	189 aa		13.83	□□□□□ -0.2
CHRD-215	ENST00000485883	NKX6-2	Q9C056	277 aa	Predicted RBP	13.83	□□□□□ -0.2
CHRD-215	ENST00000485883	MAP1LC3B	Q9GZQ8	125 aa		13.83	□□□□□ -0.2
CHRD-215	ENST00000485883	SDF2L1	Q9HCN8	221 aa		13.83	□□□□□ -0.2
CHRD-215	ENST00000485883	PGPEP1	Q9NXJ5	209 aa		13.83	□□□□□ -0.2
CHRD-215	ENST00000485883	EPM2A	B3EWF7	344 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	DNAH10OS	P0CZ25	163 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	PPT1	P50897	306 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	FGF8	P55075	233 aa	Predicted RBP	13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	XG	P55808	180 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	UBE2G2	P60604	165 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	SLA	Q13239	276 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	PRNT	Q86SH4	94 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	OR11H4	Q8NGC9	324 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	STOML3	Q8TAV4	291 aa		13.82	□□□□□ -0.2
CHRD-215	ENST00000485883	KANTR	A0A1W2PQU2	76 aa		13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	BCL2L11	O43521	198 aa		13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	IGLV2-11	P01706	119 aa		13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	SFTA3	P0C7M3	94 aa		13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	ERVFC1-1	P60608	527 aa		13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	MRPL23	Q16540	153 aa	Known RBP	13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	SMUG1	Q53HV7	270 aa		13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	SAPCD1	Q5SSQ6	148 aa		13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	ZNF471	Q9BX82	626 aa	Predicted RBP	13.81	□□□□□ -0.2
CHRD-215	ENST00000485883	IGHV3-16	A0A0C4DH30	117 aa		13.8	□□□□□ -0.2
CHRD-215	ENST00000485883	GNRH2	O43555	120 aa		13.8	□□□□□ -0.2
CHRD-215	ENST00000485883	GCG	P01275	180 aa		13.8	□□□□□ -0.2
CHRD-215	ENST00000485883	TYMS	P04818	313 aa		13.8	□□□□□ -0.2
CHRD-215	ENST00000485883	SEC11B	P0C7V7	166 aa		13.8	□□□□□ -0.2
CHRD-215	ENST00000485883	EIF5A	P63241	154 aa	Known RBP	13.8	□□□□□ -0.2
CHRD-215	ENST00000485883	RASL10A	Q92737	203 aa		13.8	□□□□□ -0.2
CHRD-215	ENST00000485883	FAM74A7	A6NL05	159 aa		13.79	□□□□□ -0.2
CHRD-215	ENST00000485883		M0R2P5	195 aa		13.79	□□□□□ -0.2
CHRD-215	ENST00000485883	PEX7	O00628	323 aa		13.79	□□□□□ -0.2
CHRD-215	ENST00000485883	PFN1	P07737	140 aa	Known RBP	13.79	□□□□□ -0.2
CHRD-215	ENST00000485883	KRTAP10-1	P60331	282 aa		13.79	□□□□□ -0.2
CHRD-215	ENST00000485883	NEGR1	Q7Z3B1	354 aa		13.79	□□□□□ -0.2
CHRD-215	ENST00000485883	HIST1H2BA	Q96A08	127 aa		13.79	□□□□□ -0.2
CHRD-215	ENST00000485883	ZNF479	Q96JC4	524 aa		13.79	□□□□□ -0.2
CHRD-215	ENST00000485883		A0A087WTM6	91 aa		13.78	□□□□□ -0.2
CHRD-215	ENST00000485883	TRGV4	A0A0C4DH28	118 aa		13.78	□□□□□ -0.2
CHRD-215	ENST00000485883	UMAD1	C9J7I0	102 aa		13.78	□□□□□ -0.2
CHRD-215	ENST00000485883		K7EQD1	137 aa		13.78	□□□□□ -0.2
CHRD-215	ENST00000485883	EREG	O14944	169 aa		13.78	□□□□□ -0.2
CHRD-215	ENST00000485883	ZNF80	P51504	273 aa	Predicted RBP	13.78	□□□□□ -0.2
CHRD-215	ENST00000485883	WFDC10B	Q8IUB3	73 aa		13.78	□□□□□ -0.2
CHRD-215	ENST00000485883	TRAV34	A0A0B4J273	112 aa		13.77	□□□□□ -0.21
CHRD-215	ENST00000485883	PFDN1	O60925	122 aa		13.77	□□□□□ -0.21
CHRD-215	ENST00000485883	CDPF1	Q6NVV7	123 aa		13.77	□□□□□ -0.21
CHRD-215	ENST00000485883	LINC00479	Q96M42	142 aa		13.77	□□□□□ -0.21
CHRD-215	ENST00000485883	LY96	Q9Y6Y9	160 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms