RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ASCL2Q99929 193 aa5.21□□□□□ -1.58
BRCA1-216ENST00000484087 HUWE1Q7Z6Z7 4374 aaKnown RBP5.21□□□□□ -1.58
BRCA1-216ENST00000484087 TRAV8-2A0A0B4J237 113 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 A0A1B0GW15 77 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 FABP5P3A8MUU1 101 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 A8MWP6 167 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 APCSP02743 223 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 PAFAH1B2P68402 229 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 HBBP68871 147 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 RIGQ13278 110 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 LINC00322Q6ZN03 302 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-216ENST00000484087 Q8TAT8 98 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 PGLYRP4Q96LB8 373 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 LINC00477Q96M19 166 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 C8orf49Q96NF6 230 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 VGLL1Q99990 258 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 PEMTQ9UBM1 199 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 LENEPQ9Y5L5 61 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 IGKV3-7A0A075B6H7 116 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 SH2D1AO60880 128 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 CRISP2P16562 243 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 CAMPP49913 170 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 FOXA3P55318 350 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-216ENST00000484087 SYNJ2BPP57105 145 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 SNRPD3P62318 126 aaKnown RBP5.2□□□□□ -1.58
BRCA1-216ENST00000484087 HIST1H1AQ02539 215 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-216ENST00000484087 COA6Q5JTJ3 125 aaKnown RBP5.2□□□□□ -1.58
BRCA1-216ENST00000484087 C9orf66Q5T8R8 295 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 TMEM136Q6ZRR5 245 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 C9orf47Q6ZRZ4 202 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 HIST3H2BBQ8N257 126 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 PPP1R14DQ9NXH3 145 aa5.2□□□□□ -1.58
BRCA1-216ENST00000484087 A0A1B0GUT8 65 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 TMEM213A2RRL7 107 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 PRAC2D3DTV9 90 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 SOCS3O14543 225 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 ORM1P02763 201 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 SMIM6P0DI80 62 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 CRIP1P50238 77 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 ERCC8Q13216 396 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 PDZD11Q5EBL8 140 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 BAGE3Q86Y29 109 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 GTSF1Q8WW33 167 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 TMEM18Q96B42 140 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 TPPP3Q9BW30 176 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 AGPAT4-IT1Q9H0P7 198 aa5.19□□□□□ -1.58
BRCA1-216ENST00000484087 TENM3Q9P273 2699 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 SORL1Q92673 2214 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 TMSB15BA0A087X1C1 80 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 TRBV7-9A0A0J9YWB2 115 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 A0A1B0GXF2 115 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 GZMBP10144 247 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 PRB4P10163 310 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-216ENST00000484087 FABP4P15090 132 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 Q0VG73 95 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 OR10J3Q5JRS4 329 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 ADAMTSL5Q6ZMM2 481 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 WFDC3Q8IUB2 231 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 LINC00518Q8N0U6 118 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 MCRIP2Q9BUT9 160 aaKnown RBP5.18□□□□□ -1.58
BRCA1-216ENST00000484087 GPR61Q9BZJ8 451 aa5.18□□□□□ -1.58
BRCA1-216ENST00000484087 ZNF256Q9Y2P7 627 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-216ENST00000484087 GRIFINA4D1Z8 144 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 C2orf70A6NJV1 201 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 F2Z2F3 143 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 SRIP30626 198 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 KLF5Q13887 457 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-216ENST00000484087 FER1L6-AS1Q8NA97 138 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 OR8A1Q8NGG7 326 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 DYNLRB2Q8TF09 96 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 C20orf173Q96LM9 149 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 PACRGQ96M98 296 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-216ENST00000484087 C12orf57Q99622 126 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 WFDC10AQ9H1F0 79 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 MS4A6AQ9H2W1 248 aa5.17□□□□□ -1.58
BRCA1-216ENST00000484087 TRAV21A0A0B4J279 112 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 DUSP14O95147 198 aaKnown RBP5.16□□□□□ -1.58
BRCA1-216ENST00000484087 GPX1P07203 203 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 CSN3P07498 182 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 FRMD6-AS1P0C7T7 363 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 TFPI2P48307 235 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 ZNF80P51504 273 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-216ENST00000484087 SLAQ13239 276 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 KIAA1644Q3SXP7 199 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 GFI1BQ5VTD9 330 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 EBLN2Q6P2I7 272 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 LYZL1Q6UWQ5 148 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 OR10D4PQ8NGN7 298 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 OR9G4Q8NGQ1 327 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 DCANP1Q8TF63 244 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 SAMD10Q9BYL1 202 aa5.16□□□□□ -1.58
BRCA1-216ENST00000484087 KMT2CQ8NEZ4 4911 aaKnown RBP5.16□□□□□ -1.58
BRCA1-216ENST00000484087 TRAV2A0A0B4J234 112 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 K7EQG2 157 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 IGLV1-51P01701 117 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 ARMS2P0C7Q2 107 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 CTRLP40313 264 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 LEPP41159 167 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 PSMG4Q5JS54 123 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms