RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 AAED1Q7RTV5 226 aa0.71□□□□□ -2.3
COPA-204ENST00000481522 ZNF565Q8N9K5 539 aa0.71□□□□□ -2.3
COPA-204ENST00000481522 C11orf40Q8WZ69 217 aa0.71□□□□□ -2.3
COPA-204ENST00000481522 CNBD2Q96M20 576 aa0.71□□□□□ -2.3
COPA-204ENST00000481522 MRPL57Q9BQC6 102 aaKnown RBP0.71□□□□□ -2.3
COPA-204ENST00000481522 HDHD2Q9H0R4 259 aa0.71□□□□□ -2.3
COPA-204ENST00000481522 SHBGP04278 402 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 PRM2P04554 102 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 RNASE3P12724 160 aaKnown RBP0.7□□□□□ -2.3
COPA-204ENST00000481522 MARCKSL1P49006 195 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 ZNF80P51504 273 aaPredicted RBP0.7□□□□□ -2.3
COPA-204ENST00000481522 DSCR4P56555 118 aaPredicted RBP0.7□□□□□ -2.3
COPA-204ENST00000481522 SUPT4H1P63272 117 aaKnown RBP0.7□□□□□ -2.3
COPA-204ENST00000481522 ZNF846Q147U1 533 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 OGFRL1Q5TC84 451 aaPredicted RBP0.7□□□□□ -2.3
COPA-204ENST00000481522 FAM151BQ6UXP7 276 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 C10orf67Q8IYJ2 551 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 LINC00471Q8N535 108 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 GPR32P1Q8NGA4 272 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 AQP3Q92482 292 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 EFCAB1Q9HAE3 211 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 FGFR1OP2Q9NVK5 253 aa0.7□□□□□ -2.3
COPA-204ENST00000481522 TRBV20OR9-2A0A075B6H5 130 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 A0A1B0GV50 99 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 FUOMA2VDF0 154 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 CXCR6O00574 342 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 STX5Q13190 355 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 ESRGQ1W209 222 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 COQ5Q5HYK3 327 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 GID4Q8IVV7 300 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 OPTCQ9UBM4 332 aa0.69□□□□□ -2.3
COPA-204ENST00000481522 EVPLLA8MZ36 301 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 LRRN3E7EW58 273 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 DEXIO95424 95 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 DYNLT3P51808 116 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 NAA20P61599 178 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 CCL20P78556 96 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 IFITM2Q01629 132 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 GRK1Q15835 563 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 LCN15Q6UWW0 184 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 MCFD2Q8NI22 146 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 USE1Q9NZ43 259 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 MED11Q9P086 117 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 ARL5AQ9Y689 179 aa0.68□□□□□ -2.3
COPA-204ENST00000481522 OR5F1O95221 314 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 CLPSP04118 112 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 SERPINE1P05121 402 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 SCTP09683 121 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 MAGEA2P43356 314 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 GUK1Q16774 197 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 DEFB106AQ8N104 65 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 RASSF5Q8WWW0 418 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 PRTFDC1Q9NRG1 225 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 CKLFQ9UBR5 152 aa0.67□□□□□ -2.3
COPA-204ENST00000481522 A0A087WX48 190 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 HTR1AP08908 422 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 MIFP14174 115 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 MAXP61244 160 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 AADACL3Q5VUY0 350 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 OR4D11Q8NGI4 311 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 CISHQ9NSE2 258 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 TP73-AS1Q9UF72 201 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 HILPDAQ9Y5L2 63 aa0.66□□□□□ -2.3
COPA-204ENST00000481522 INMT-MINDY4F8WBC2 141 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 ACOX3O15254 700 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 TPM3P06753 285 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 RAB5BP61020 215 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 KISS1Q15726 138 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 DEFB114Q30KQ6 69 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 C8orf74Q6P047 294 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 RPL22L1Q6P5R6 122 aaKnown RBP0.65□□□□□ -2.31
COPA-204ENST00000481522 ZNF826PQ6ZT77 177 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 IQCF2Q8IXL9 164 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 OR2T4Q8NH00 348 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 SCGB3A1Q96QR1 104 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 DERL1Q9BUN8 251 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 WDR61Q9GZS3 305 aaKnown RBP0.65□□□□□ -2.31
COPA-204ENST00000481522 OR51I1Q9H343 314 aa0.65□□□□□ -2.31
COPA-204ENST00000481522 NOSIPQ9Y314 301 aaKnown RBP0.65□□□□□ -2.31
COPA-204ENST00000481522 LSM5Q9Y4Y9 91 aaKnown RBP0.65□□□□□ -2.31
COPA-204ENST00000481522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.64□□□□□ -2.31
COPA-204ENST00000481522 TRBV6-7A0A0A0MS04 114 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 PSMD12O00232 456 aaPredicted RBP0.64□□□□□ -2.31
COPA-204ENST00000481522 FADS1O60427 444 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 ISG15P05161 165 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST1H2BOP23527 126 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 BRS3P32247 399 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST1H2BBP33778 126 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 AP2S1P53680 142 aaPredicted RBP0.64□□□□□ -2.31
COPA-204ENST00000481522 TCL1AP56279 114 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST1H2BDP58876 126 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST1H2BCP62807 126 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST2H2BEQ16778 126 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 CCSMST1Q4G0I0 132 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 SPANXN3Q5MJ09 141 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.64□□□□□ -2.31
COPA-204ENST00000481522 SFXN4Q6P4A7 337 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 Q6ZS49 121 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 KRTAP19-3Q7Z4W3 81 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST1H2BHQ93079 126 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms