RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 M0R2P5 195 aa12.74□□□□□ -0.37
ABCF3-214ENST00000480562 HMGB3O15347 200 aaKnown RBP12.74□□□□□ -0.37
ABCF3-214ENST00000480562 KRTAP10-1P60331 282 aa12.74□□□□□ -0.37
ABCF3-214ENST00000480562 RAB2AP61019 212 aa12.74□□□□□ -0.37
ABCF3-214ENST00000480562 GNG5P63218 68 aa12.74□□□□□ -0.37
ABCF3-214ENST00000480562 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
ABCF3-214ENST00000480562 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
ABCF3-214ENST00000480562 TXNDC17Q9BRA2 123 aa12.74□□□□□ -0.37
ABCF3-214ENST00000480562 TRAV21A0A0B4J279 112 aa12.73□□□□□ -0.37
ABCF3-214ENST00000480562 A0A1W2PPV4 95 aa12.73□□□□□ -0.37
ABCF3-214ENST00000480562 TYMSP04818 313 aa12.73□□□□□ -0.37
ABCF3-214ENST00000480562 XGP55808 180 aa12.73□□□□□ -0.37
ABCF3-214ENST00000480562 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
ABCF3-214ENST00000480562 TREM1Q9NP99 234 aa12.73□□□□□ -0.37
ABCF3-214ENST00000480562 CRYGDP07320 174 aa12.72□□□□□ -0.37
ABCF3-214ENST00000480562 PQLC2Q6ZP29 291 aa12.72□□□□□ -0.37
ABCF3-214ENST00000480562 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
ABCF3-214ENST00000480562 HERC1Q15751 4861 aa12.72□□□□□ -0.37
ABCF3-214ENST00000480562 K7EP13 123 aa12.71□□□□□ -0.37
ABCF3-214ENST00000480562 NHLRC2Q8NBF2 726 aa12.71□□□□□ -0.37
ABCF3-214ENST00000480562 SDF2L1Q9HCN8 221 aa12.71□□□□□ -0.37
ABCF3-214ENST00000480562 GATA1P15976 413 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-214ENST00000480562 OR10G9Q8NGN4 311 aa12.7□□□□□ -0.38
ABCF3-214ENST00000480562 OR10G7Q8NGN6 311 aa12.7□□□□□ -0.38
ABCF3-214ENST00000480562 VPS13BQ7Z7G8 4022 aa12.7□□□□□ -0.38
ABCF3-214ENST00000480562 ARL6IP6Q8N6S5 226 aa12.69□□□□□ -0.38
ABCF3-214ENST00000480562 ASB13Q8WXK3 278 aa12.69□□□□□ -0.38
ABCF3-214ENST00000480562 KCNS1Q96KK3 526 aa12.69□□□□□ -0.38
ABCF3-214ENST00000480562 A6NHS1 94 aa12.68□□□□□ -0.38
ABCF3-214ENST00000480562 ARL14EPLP0DKL9 152 aa12.68□□□□□ -0.38
ABCF3-214ENST00000480562 PPT1P50897 306 aa12.68□□□□□ -0.38
ABCF3-214ENST00000480562 DEFA1P59665 94 aa12.68□□□□□ -0.38
ABCF3-214ENST00000480562 DEFA3P59666 94 aa12.68□□□□□ -0.38
ABCF3-214ENST00000480562 C10orf126Q8N4M7 172 aa12.68□□□□□ -0.38
ABCF3-214ENST00000480562 DNAH8Q96JB1 4490 aa12.68□□□□□ -0.38
ABCF3-214ENST00000480562 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
ABCF3-214ENST00000480562 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
ABCF3-214ENST00000480562 SH2D6Q7Z4S9 175 aa12.67□□□□□ -0.38
ABCF3-214ENST00000480562 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
ABCF3-214ENST00000480562 IGHV3-38A0A0C4DH36 116 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 INAFM2P0DMQ5 153 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 GCSHP23434 173 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 CDC34P49427 236 aaPredicted RBP12.66□□□□□ -0.38
ABCF3-214ENST00000480562 TIRAPP58753 221 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 ZNF876PQ49A33 203 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 Q5VSD8 79 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 DPPA3Q6W0C5 159 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 NDFIP1Q9BT67 221 aa12.66□□□□□ -0.38
ABCF3-214ENST00000480562 IGHV3-73A0A0B4J1V6 119 aa12.65□□□□□ -0.38
ABCF3-214ENST00000480562 TCRAP04437 139 aa12.65□□□□□ -0.38
ABCF3-214ENST00000480562 CFAP126Q5VTH2 177 aa12.65□□□□□ -0.38
ABCF3-214ENST00000480562 HSD17B11Q8NBQ5 300 aa12.65□□□□□ -0.38
ABCF3-214ENST00000480562 RS1O15537 224 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 PSCAO43653 123 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 GCGP01275 180 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
ABCF3-214ENST00000480562 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 STAG3L3P0CL85 134 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 TMEM75Q8N9X5 138 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 C5orf17Q8NAS9 161 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 RAB24Q969Q5 203 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 PSG8Q9UQ74 426 aa12.64□□□□□ -0.39
ABCF3-214ENST00000480562 TRAV8-6A0A0B4J262 113 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 SERTM2A0A1B0GWG4 89 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-214ENST00000480562 GCHFRP30047 84 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 HAMPP81172 84 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 LINC01556Q5JQF7 62 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 OR10J3Q5JRS4 329 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 FRZBQ92765 325 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 Q9HAA7 133 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 ALG5Q9Y673 324 aa12.63□□□□□ -0.39
ABCF3-214ENST00000480562 IGLV5-52A0A0A0MRZ9 124 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 LRCOL1A6NCL2 159 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 TAAR5O14804 337 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 IGLV2-11P01706 119 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 RHOHQ15669 191 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 OR2G3Q8NGZ4 309 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
ABCF3-214ENST00000480562 TRBV6-4A0A1B0GX49 114 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 PGPEP1LA6NFU8 196 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 K7EQM0 130 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 IGHV3-30P01768 117 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 IGHV3-30-3P0DP02 117 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 IGHV3-30-5P0DP03 117 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 ATP6V0CP27449 155 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
ABCF3-214ENST00000480562 FLI1Q01543 452 aaPredicted RBP12.61□□□□□ -0.39
ABCF3-214ENST00000480562 ZNF506Q5JVG8 444 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 SUN5Q8TC36 379 aa12.61□□□□□ -0.39
ABCF3-214ENST00000480562 GGTLC3B5MD39 225 aa12.6□□□□□ -0.39
ABCF3-214ENST00000480562 SMUG1Q53HV7 270 aa12.6□□□□□ -0.39
ABCF3-214ENST00000480562 PSMG3Q9BT73 122 aaPredicted RBP12.6□□□□□ -0.39
ABCF3-214ENST00000480562 SH3BGRL3Q9H299 93 aa12.6□□□□□ -0.39
ABCF3-214ENST00000480562 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms