RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZFC3H1O60293 1989 aaKnown RBP1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 NCKAP5O14513 1909 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 MYH6P13533 1939 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 APOC4-APOC2K7ER74 178 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 ERC2-IT1O76042 136 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 APOC2P02655 101 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 IFITM1P13164 125 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 PDE6HQ13956 83 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 KRTAP26-1Q6PEX3 210 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 FOXI2Q6ZQN5 318 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 CLECL1Q8IZS7 167 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 SPACA4Q8TDM5 124 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 SMIM7Q9BQ49 75 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 TANC2Q9HCD6 1990 aa1.74□□□□□ -2.13
SMARCA1-204ENST00000478420 CXCL8P10145 99 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 MIR22HGQ0VDD5 57 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 COL5A1-AS1Q5SY13 56 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 OR2T2Q6IF00 324 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 ZNF833PQ6ZTB9 187 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 SLC25A26Q70HW3 274 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 TTC9CQ8N5M4 171 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 DSCR8Q96T75 97 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 SPANXDQ9BXN6 97 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 COL24A1Q17RW2 1714 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 MGAMO43451 1857 aa1.73□□□□□ -2.13
SMARCA1-204ENST00000478420 NRKQ7Z2Y5 1582 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 MAPKBP1O60336 1514 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 NINQ8N4C6 2090 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 A0A1W2PRS3 328 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 SDHAF1A6NFY7 115 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 IL5P05113 134 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 PIRTP0C851 137 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 ADCYAP1P18509 176 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 BRS3P32247 399 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 SVBPQ8N300 66 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 C10orf105Q8TEF2 133 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 SPTSSAQ969W0 71 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 TMEM242Q9NWH2 141 aa1.72□□□□□ -2.13
SMARCA1-204ENST00000478420 ADGRB3O60242 1522 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 TRAV14DV4A0A0A6YYC5 116 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 GYPBP06028 91 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 Q1T7F1 81 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 C1orf137Q5JT78 98 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 C2orf82Q6UX34 121 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 DYNLRB2Q8TF09 96 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 ALPK3Q96L96 1907 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 MYH13Q9UKX3 1938 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 BCORL1Q5H9F3 1711 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 MUC4Q99102 2169 aa1.71□□□□□ -2.14
SMARCA1-204ENST00000478420 MYH1P12882 1939 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 HELZP42694 1942 aaKnown RBP1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 RTEL1-TNFRSF6BF6WH68 1400 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 J3QRE1 110 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 NDUFB6O95139 128 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 PRB4P10163 310 aaPredicted RBP1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 NPC2P61916 151 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 CNBPP62633 177 aaKnown RBP1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 INSL4Q14641 139 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 ELOBQ15370 118 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 C9orf62Q8N4C0 152 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 Q8N8P6 123 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 NDUFA12Q9UI09 145 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 NUMA1Q14980 2115 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 COL4A5P29400 1685 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 KIDINS220Q9ULH0 1771 aa1.7□□□□□ -2.14
SMARCA1-204ENST00000478420 SNCGO76070 127 aa1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 TSKUQ8WUA8 353 aa1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 AKAP11Q9UKA4 1901 aa1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 PCNX2A6NKB5 2137 aa1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 PXDNLA1KZ92 1463 aa1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 ADGRL2O95490 1459 aa1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 CECR2Q9BXF3 1484 aa1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.69□□□□□ -2.14
SMARCA1-204ENST00000478420 HEATR5BQ9P2D3 2071 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 MYLKQ15746 1914 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 ADAMTS7Q9UKP4 1686 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 TROQ12816 1431 aaPredicted RBP1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 TCRBV3S1A0A5B6 114 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 TMEM262E9PQX1 116 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 PIPP12273 146 aaPredicted RBP1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 S100A7L2Q5SY68 101 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 SPANXN1Q5VSR9 72 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 FAIMQ9NVQ4 179 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 KIAA1549Q9HCM3 1950 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 COL4A2P08572 1712 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 PTPRMP28827 1452 aa1.68□□□□□ -2.14
SMARCA1-204ENST00000478420 SCN3AQ9NY46 2000 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 PPIP5K1Q6PFW1 1433 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 DISP1Q96F81 1524 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 LRP5O75197 1615 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 TRAV2A0A0B4J234 112 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 TRAV17A0A0B4J275 112 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 UBA52P62987 128 aaKnown RBP1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 RBM3P98179 157 aaKnown RBP1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 C12orf73Q69YU5 71 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 C4orf33Q8N1A6 199 aa1.67□□□□□ -2.14
SMARCA1-204ENST00000478420 TMEM141Q96I45 108 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms