RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TRPT1Q86TN4 253 aaKnown RBP21.24■□□□□ 0.99
VEGFA-211ENST00000476772 ZNF324O75467 553 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-211ENST00000476772 TPPP3Q9BW30 176 aa21.23■□□□□ 0.99
VEGFA-211ENST00000476772 ANXA2RQ3ZCQ2 193 aa21.22■□□□□ 0.99
VEGFA-211ENST00000476772 CRXO43186 299 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-211ENST00000476772 NOTCH3Q9UM47 2321 aa21.21■□□□□ 0.99
VEGFA-211ENST00000476772 WIPF1O43516 503 aa21.21■□□□□ 0.99
VEGFA-211ENST00000476772 IGLC6P0CF74 106 aa21.21■□□□□ 0.99
VEGFA-211ENST00000476772 GTSCR1Q86UQ5 136 aa21.2■□□□□ 0.98
VEGFA-211ENST00000476772 FER1L6-AS1Q8NA97 138 aa21.2■□□□□ 0.98
VEGFA-211ENST00000476772 LYZL1Q6UWQ5 148 aa21.19■□□□□ 0.98
VEGFA-211ENST00000476772 COL6A5A8TX70 2615 aa21.19■□□□□ 0.98
VEGFA-211ENST00000476772 TRGC2P03986 189 aa21.18■□□□□ 0.98
VEGFA-211ENST00000476772 ARMS2P0C7Q2 107 aa21.18■□□□□ 0.98
VEGFA-211ENST00000476772 RBMY1A1P0DJD3 496 aaKnown RBP21.18■□□□□ 0.98
VEGFA-211ENST00000476772 RBMY1CP0DJD4 496 aa21.18■□□□□ 0.98
VEGFA-211ENST00000476772 RBMY1FQ15415 496 aaKnown RBP21.18■□□□□ 0.98
VEGFA-211ENST00000476772 ATP5L2Q7Z4Y8 100 aa21.18■□□□□ 0.98
VEGFA-211ENST00000476772 DEFB125Q8N687 156 aa21.18■□□□□ 0.98
VEGFA-211ENST00000476772 A0A1B0GXF2 115 aa21.17■□□□□ 0.98
VEGFA-211ENST00000476772 CTRLP40313 264 aa21.17■□□□□ 0.98
VEGFA-211ENST00000476772 FAM159AQ6UWV7 190 aa21.17■□□□□ 0.98
VEGFA-211ENST00000476772 A0A1B0GUT8 65 aa21.15■□□□□ 0.98
VEGFA-211ENST00000476772 MUC21A0A0G2JKD1 596 aa21.15■□□□□ 0.98
VEGFA-211ENST00000476772 MUC21A0A140T8X8 626 aa21.15■□□□□ 0.98
VEGFA-211ENST00000476772 C1orf196B1AJZ1 125 aa21.15■□□□□ 0.98
VEGFA-211ENST00000476772 SNURFLB1AK76 121 aa21.15■□□□□ 0.98
VEGFA-211ENST00000476772 GNRH2O43555 120 aa21.15■□□□□ 0.98
VEGFA-211ENST00000476772 CAMPP49913 170 aa21.14■□□□□ 0.97
VEGFA-211ENST00000476772 HBBP68871 147 aa21.14■□□□□ 0.97
VEGFA-211ENST00000476772 RASL11AQ6T310 242 aa21.14■□□□□ 0.97
VEGFA-211ENST00000476772 TMEM136Q6ZRR5 245 aa21.14■□□□□ 0.97
VEGFA-211ENST00000476772 BORCS7Q96B45 105 aa21.14■□□□□ 0.97
VEGFA-211ENST00000476772 MDFIQ99750 246 aa21.14■□□□□ 0.97
VEGFA-211ENST00000476772 TRAPPC1Q9Y5R8 145 aa21.14■□□□□ 0.97
VEGFA-211ENST00000476772 RPL35AP18077 110 aaKnown RBP21.13■□□□□ 0.97
VEGFA-211ENST00000476772 RAB4BP61018 213 aa21.13■□□□□ 0.97
VEGFA-211ENST00000476772 OXLD1Q5BKU9 147 aa21.13■□□□□ 0.97
VEGFA-211ENST00000476772 PRR31Q5SQ13 230 aa21.13■□□□□ 0.97
VEGFA-211ENST00000476772 KCNS1Q96KK3 526 aa21.13■□□□□ 0.97
VEGFA-211ENST00000476772 GNB1LQ9BYB4 327 aa21.13■□□□□ 0.97
VEGFA-211ENST00000476772 H3BVH4 76 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 ASIPP42127 132 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 SSTP61278 116 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 NUTF2P61970 127 aaKnown RBP21.12■□□□□ 0.97
VEGFA-211ENST00000476772 TDRG1Q3Y452 100 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 COX19Q49B96 90 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 WDR73Q6P4I2 378 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 ZFP82Q8N141 532 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 XCL2Q9UBD3 114 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 IGHV1OR15-1A0A075B7D0 117 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 AMBPP02760 352 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 FABP9Q0Z7S8 132 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 RIGQ13278 110 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 FRZBQ92765 325 aa21.12■□□□□ 0.97
VEGFA-211ENST00000476772 PHOX2AO14813 284 aa21.11■□□□□ 0.97
VEGFA-211ENST00000476772 INSP01308 110 aa21.11■□□□□ 0.97
VEGFA-211ENST00000476772 CMYA5Q8N3K9 4069 aa21.11■□□□□ 0.97
VEGFA-211ENST00000476772 F2Z2F3 143 aa21.1■□□□□ 0.97
VEGFA-211ENST00000476772 S100A4P26447 101 aaKnown RBP21.1■□□□□ 0.97
VEGFA-211ENST00000476772 SSBP4Q9BWG4 385 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-211ENST00000476772 TP53TG3Q9ULZ0 132 aa21.1■□□□□ 0.97
VEGFA-211ENST00000476772 SNAI2O43623 268 aa21.09■□□□□ 0.97
VEGFA-211ENST00000476772 MRPL18Q9H0U6 180 aaKnown RBP21.09■□□□□ 0.97
VEGFA-211ENST00000476772 TIMM8BQ9Y5J9 83 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-211ENST00000476772 OR5AL1P0C617 328 aa21.09■□□□□ 0.97
VEGFA-211ENST00000476772 RAB5BP61020 215 aa21.09■□□□□ 0.97
VEGFA-211ENST00000476772 DNLZQ5SXM8 178 aa21.09■□□□□ 0.97
VEGFA-211ENST00000476772 Q8N1Y9 231 aa21.09■□□□□ 0.97
VEGFA-211ENST00000476772 CNFNQ9BYD5 112 aa21.09■□□□□ 0.97
VEGFA-211ENST00000476772 HLA-DQA1P01909 254 aa21.08■□□□□ 0.96
VEGFA-211ENST00000476772 MT-ND6P03923 174 aa21.08■□□□□ 0.96
VEGFA-211ENST00000476772 RNASE3P12724 160 aaKnown RBP21.08■□□□□ 0.96
VEGFA-211ENST00000476772 LURAP1LQ8IV03 231 aa21.08■□□□□ 0.96
VEGFA-211ENST00000476772 OR10AG1Q8NH19 301 aa21.08■□□□□ 0.96
VEGFA-211ENST00000476772 C20orf144Q9BQM9 153 aa21.08■□□□□ 0.96
VEGFA-211ENST00000476772 ANK2Q01484 3957 aa21.08■□□□□ 0.96
VEGFA-211ENST00000476772 GIG44P09565 113 aaPredicted RBP21.07■□□□□ 0.96
VEGFA-211ENST00000476772 NTF3P20783 257 aa21.06■□□□□ 0.96
VEGFA-211ENST00000476772 A0A1B0GW15 77 aa21.05■□□□□ 0.96
VEGFA-211ENST00000476772 MED14OSP0DP75 135 aa21.05■□□□□ 0.96
VEGFA-211ENST00000476772 TWIST1Q15672 202 aa21.05■□□□□ 0.96
VEGFA-211ENST00000476772 SPRY2O43597 315 aa21.05■□□□□ 0.96
VEGFA-211ENST00000476772 MORN3Q6PF18 240 aaPredicted RBP21.05■□□□□ 0.96
VEGFA-211ENST00000476772 MSRB1Q9NZV6 116 aa21.05■□□□□ 0.96
VEGFA-211ENST00000476772 IGHV3-16A0A0C4DH30 117 aa21.04■□□□□ 0.96
VEGFA-211ENST00000476772 C1orf158Q8N1D5 194 aa21.04■□□□□ 0.96
VEGFA-211ENST00000476772 LINC01587Q99440 93 aa21.04■□□□□ 0.96
VEGFA-211ENST00000476772 SCRT2Q9NQ03 307 aa21.04■□□□□ 0.96
VEGFA-211ENST00000476772 CBY3A6NI87 242 aa21.03■□□□□ 0.96
VEGFA-211ENST00000476772 S100A8P05109 93 aa21.03■□□□□ 0.96
VEGFA-211ENST00000476772 TRGC1P0CF51 173 aa21.03■□□□□ 0.96
VEGFA-211ENST00000476772 HTN1P15515 57 aa21.03■□□□□ 0.96
VEGFA-211ENST00000476772 SLAQ13239 276 aa21.03■□□□□ 0.96
VEGFA-211ENST00000476772 GATD1Q8NB37 220 aa21.02■□□□□ 0.96
VEGFA-211ENST00000476772 MDFICQ9P1T7 246 aa21.02■□□□□ 0.96
VEGFA-211ENST00000476772 HIST1H2BKO60814 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 APCSP02743 223 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST1H2BJP06899 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST1H2BOP23527 126 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms