RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
HDAC1-206ENST00000476391 ENSAO43768 121 aaKnown RBP10.63□□□□□ -0.71
HDAC1-206ENST00000476391 ZNF56Q15929 161 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 DEFB127Q9H1M4 99 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 FRYLO94915 3013 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 NTN3O00634 580 aaPredicted RBP10.63□□□□□ -0.71
HDAC1-206ENST00000476391 CCL3L1P16619 93 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 GLRXP35754 106 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 EBI3Q14213 229 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
HDAC1-206ENST00000476391 A4D1N5 150 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 K7EIM0 57 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 UQCRQO14949 82 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 PF4V1P10720 104 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 C2orf66Q6UXQ4 117 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 H3BT86 120 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 RPS28P62857 69 aaKnown RBP10.62□□□□□ -0.71
HDAC1-206ENST00000476391 DEFB121Q5J5C9 76 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 TEX36Q5VZQ5 186 aa10.62□□□□□ -0.71
HDAC1-206ENST00000476391 FAM19A5Q7Z5A7 132 aaPredicted RBP10.62□□□□□ -0.71
HDAC1-206ENST00000476391 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
HDAC1-206ENST00000476391 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
HDAC1-206ENST00000476391 POM121L12Q8N7R1 296 aa10.61□□□□□ -0.71
HDAC1-206ENST00000476391 CITED2Q99967 270 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-206ENST00000476391 TRIOO75962 3097 aa10.61□□□□□ -0.71
HDAC1-206ENST00000476391 IGKV3D-20A0A0C4DH25 116 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 TRBV30A0A0K0K1B3 111 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 CD59P13987 128 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 C2orf82Q6UX34 121 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 CFHR4Q92496 578 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.6□□□□□ -0.71
HDAC1-206ENST00000476391 FAM236AA0A1B0GUQ0 79 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 FAM236BA0A1B0GV22 79 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 C11orf86A6NJI1 115 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 HERVK_113P63121 156 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 TCF15Q12870 199 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 LINC00526Q96FQ7 95 aa10.6□□□□□ -0.71
HDAC1-206ENST00000476391 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 ATP5G1P05496 136 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 EMP1P54849 157 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 TMEM200BQ69YZ2 307 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 CNEP1R1Q8N9A8 125 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 OR13C6PQ8NH95 151 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 ZNF318Q5VUA4 2279 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 IGLV4-69A0A075B6H9 119 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 OOSP1A8MZH6 123 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
HDAC1-206ENST00000476391 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 CRYGDP07320 174 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 CD3EP07766 207 aa10.59□□□□□ -0.71
HDAC1-206ENST00000476391 TNFAIP6P98066 277 aaPredicted RBP10.59□□□□□ -0.71
HDAC1-206ENST00000476391 IGLV3-9A0A075B6K5 115 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 IGHV3-72A0A0B4J1Y9 119 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 CNTFRP26992 372 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 FREM2Q5SZK8 3169 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 ELANEP08246 267 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 Q1RN00 199 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 SPANXN1Q5VSR9 72 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 MDS2Q8NDY4 140 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 AMELXQ99217 191 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 UBTD1Q9HAC8 227 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 PRUNE2Q8WUY3 3088 aa10.58□□□□□ -0.72
HDAC1-206ENST00000476391 RBAKDNA6NC62 111 aa10.57□□□□□ -0.72
HDAC1-206ENST00000476391 PMVKQ15126 192 aa10.57□□□□□ -0.72
HDAC1-206ENST00000476391 ZNF474Q6S9Z5 364 aaPredicted RBP10.57□□□□□ -0.72
HDAC1-206ENST00000476391 TMEM219Q86XT9 240 aa10.57□□□□□ -0.72
HDAC1-206ENST00000476391 IGHV1-69DA0A0B4J2H0 117 aa10.57□□□□□ -0.72
HDAC1-206ENST00000476391 H7C2G1 150 aa10.57□□□□□ -0.72
HDAC1-206ENST00000476391 ACYP1P07311 99 aa10.57□□□□□ -0.72
HDAC1-206ENST00000476391 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
HDAC1-206ENST00000476391 H7C423 109 aa10.56□□□□□ -0.72
HDAC1-206ENST00000476391 ADIPOQQ15848 244 aa10.56□□□□□ -0.72
HDAC1-206ENST00000476391 ZGRF1Q86YA3 2104 aa10.56□□□□□ -0.72
HDAC1-206ENST00000476391 J3QQQ9 107 aa10.56□□□□□ -0.72
HDAC1-206ENST00000476391 DYNAPQ8N1N2 210 aa10.56□□□□□ -0.72
HDAC1-206ENST00000476391 IGHV1-46P01743 117 aa10.55□□□□□ -0.72
HDAC1-206ENST00000476391 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
HDAC1-206ENST00000476391 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
HDAC1-206ENST00000476391 SLC25A15Q9Y619 301 aa10.55□□□□□ -0.72
HDAC1-206ENST00000476391 METTL26Q96S19 204 aa10.55□□□□□ -0.72
HDAC1-206ENST00000476391 M0R381 172 aa10.54□□□□□ -0.72
HDAC1-206ENST00000476391 TRIAP1O43715 76 aa10.54□□□□□ -0.72
HDAC1-206ENST00000476391 GFRALQ6UXV0 394 aa10.54□□□□□ -0.72
HDAC1-206ENST00000476391 C17orf100A8MU93 164 aa10.54□□□□□ -0.72
HDAC1-206ENST00000476391 C3orf36Q3SXR2 165 aa10.54□□□□□ -0.72
HDAC1-206ENST00000476391 C14orf178Q8N769 122 aaPredicted RBP10.54□□□□□ -0.72
HDAC1-206ENST00000476391 DUX3Q96PT4 197 aa10.54□□□□□ -0.72
HDAC1-206ENST00000476391 SMAD5-AS1Q9Y6J3 95 aa10.54□□□□□ -0.72
HDAC1-206ENST00000476391 PPP1R17O96001 155 aa10.53□□□□□ -0.72
HDAC1-206ENST00000476391 IGFL4Q6B9Z1 124 aa10.53□□□□□ -0.72
HDAC1-206ENST00000476391 MUSTN1Q8IVN3 82 aa10.53□□□□□ -0.72
HDAC1-206ENST00000476391 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
HDAC1-206ENST00000476391 CACNA1GO43497 2377 aa10.52□□□□□ -0.72
HDAC1-206ENST00000476391 TSHBP01222 138 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 COX6CP09669 75 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 MFAP4P55083 255 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms