RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 SPRY2O43597 315 aa12.64□□□□□ -0.39
TVP23B-202ENST00000476139 GATA3P23771 443 aa12.64□□□□□ -0.39
TVP23B-202ENST00000476139 CFHR3Q02985 330 aa12.64□□□□□ -0.39
TVP23B-202ENST00000476139 PRR9Q5T870 116 aa12.64□□□□□ -0.39
TVP23B-202ENST00000476139 H3BUA1 57 aa12.64□□□□□ -0.39
TVP23B-202ENST00000476139 F6UB75 175 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 BVES-AS1Q5T3Y7 98 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 BRI3O95415 125 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 SRSF2Q01130 221 aaKnown RBP12.63□□□□□ -0.39
TVP23B-202ENST00000476139 ORAOV1Q8WV07 137 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 MRPL53Q96EL3 112 aaKnown RBP12.63□□□□□ -0.39
TVP23B-202ENST00000476139 RNF185Q96GF1 192 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 VAMP3Q15836 100 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
TVP23B-202ENST00000476139 SOCS3O14543 225 aa12.62□□□□□ -0.39
TVP23B-202ENST00000476139 A0A0G2JLM5 398 aa12.62□□□□□ -0.39
TVP23B-202ENST00000476139 C9orf139Q6ZV77 190 aa12.62□□□□□ -0.39
TVP23B-202ENST00000476139 HIST1H1AQ02539 215 aaPredicted RBP12.61□□□□□ -0.39
TVP23B-202ENST00000476139 APCP25054 2843 aa12.61□□□□□ -0.39
TVP23B-202ENST00000476139 HBDP02042 147 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 KIR3DS1Q14943 382 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 DKK2Q9UBU2 259 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 TRAV26-2A0A0B4J265 109 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 IGHV7-4-1A0A0J9YVY3 117 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 PSMB8P28062 276 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 TAX1BP3O14907 124 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 UBE2V1Q13404 147 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 IFI27L1Q96BM0 104 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
TVP23B-202ENST00000476139 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
TVP23B-202ENST00000476139 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
TVP23B-202ENST00000476139 COX8AP10176 69 aa12.59□□□□□ -0.39
TVP23B-202ENST00000476139 C2orf91Q6ZV80 131 aa12.59□□□□□ -0.39
TVP23B-202ENST00000476139 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
TVP23B-202ENST00000476139 UFC1Q9Y3C8 167 aa12.58□□□□□ -0.4
TVP23B-202ENST00000476139 TLN2Q9Y4G6 2542 aa12.58□□□□□ -0.4
TVP23B-202ENST00000476139 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
TVP23B-202ENST00000476139 LEPP41159 167 aa12.58□□□□□ -0.4
TVP23B-202ENST00000476139 PPP1R14DQ9NXH3 145 aa12.58□□□□□ -0.4
TVP23B-202ENST00000476139 NMUP48645 174 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 CREBBPQ92793 2442 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 SMPXQ9UHP9 88 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 PCP2Q8IVA1 136 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 WFDC12Q8WWY7 111 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
TVP23B-202ENST00000476139 SORL1Q92673 2214 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 H3BVH4 76 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 BEX4Q9NWD9 120 aaPredicted RBP12.56□□□□□ -0.4
TVP23B-202ENST00000476139 CUBNO60494 3623 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 AMMECR1LQ6DCA0 310 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 RNASE8Q8TDE3 154 aaKnown RBP12.56□□□□□ -0.4
TVP23B-202ENST00000476139 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 NAA38Q9BRA0 125 aaKnown RBP12.56□□□□□ -0.4
TVP23B-202ENST00000476139 TTTY13Q9BZ97 58 aa12.56□□□□□ -0.4
TVP23B-202ENST00000476139 SPANXN1Q5VSR9 72 aa12.55□□□□□ -0.4
TVP23B-202ENST00000476139 DEFB125Q8N687 156 aa12.55□□□□□ -0.4
TVP23B-202ENST00000476139 J3QLI3 93 aa12.54□□□□□ -0.4
TVP23B-202ENST00000476139 OVOL1O14753 267 aa12.54□□□□□ -0.4
TVP23B-202ENST00000476139 RNASE4P34096 147 aaKnown RBP12.54□□□□□ -0.4
TVP23B-202ENST00000476139 PRSS1P07477 247 aa12.54□□□□□ -0.4
TVP23B-202ENST00000476139 FGF6P10767 208 aa12.54□□□□□ -0.4
TVP23B-202ENST00000476139 LGALS9BQ3B8N2 356 aa12.54□□□□□ -0.4
TVP23B-202ENST00000476139 LGALS9CQ6DKI2 356 aa12.54□□□□□ -0.4
TVP23B-202ENST00000476139 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
TVP23B-202ENST00000476139 Q5PR19 223 aa12.53□□□□□ -0.4
TVP23B-202ENST00000476139 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
TVP23B-202ENST00000476139 LENEPQ9Y5L5 61 aa12.53□□□□□ -0.4
TVP23B-202ENST00000476139 VPREB3Q9UKI3 123 aa12.53□□□□□ -0.4
TVP23B-202ENST00000476139 TENM4Q6N022 2769 aa12.53□□□□□ -0.4
TVP23B-202ENST00000476139 PPBPP02775 128 aa12.52□□□□□ -0.4
TVP23B-202ENST00000476139 DEFB113Q30KQ7 82 aa12.52□□□□□ -0.4
TVP23B-202ENST00000476139 TMEM97Q5BJF2 176 aa12.52□□□□□ -0.4
TVP23B-202ENST00000476139 Q6YL49 198 aa12.52□□□□□ -0.4
TVP23B-202ENST00000476139 ZNF580Q9UK33 172 aa12.52□□□□□ -0.4
TVP23B-202ENST00000476139 MYO9AB2RTY4 2548 aa12.52□□□□□ -0.41
TVP23B-202ENST00000476139 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
TVP23B-202ENST00000476139 GNRH2O43555 120 aa12.52□□□□□ -0.41
TVP23B-202ENST00000476139 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
TVP23B-202ENST00000476139 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
TVP23B-202ENST00000476139 CR1P17927 2039 aa12.52□□□□□ -0.41
TVP23B-202ENST00000476139 PRRC2AP48634 2157 aaKnown RBP12.52□□□□□ -0.41
TVP23B-202ENST00000476139 M0R381 172 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 FAM19A4Q96LR4 140 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 C7orf71A4D174 169 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 K7EMT4 169 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
TVP23B-202ENST00000476139 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 DEFB104AQ8WTQ1 72 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 Q96MF0 132 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 FOXC2Q99958 501 aa12.51□□□□□ -0.41
TVP23B-202ENST00000476139 IGKV2D-26A0A0A0MRZ7 120 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 FSHBP01225 129 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 SYNJ2BPP57105 145 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 OR2K2Q8NGT1 345 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms