RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 AKR1C8PQ5T2L2 129 aa7.74□□□□□ -1.17
CKS1B-206ENST00000474215 CYB561D1Q8N8Q1 229 aa7.74□□□□□ -1.17
CKS1B-206ENST00000474215 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
CKS1B-206ENST00000474215 ZNF80P51504 273 aaPredicted RBP7.73□□□□□ -1.17
CKS1B-206ENST00000474215 CRYBA4P53673 196 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 SAPCD1Q5SSQ6 148 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 KCNRGQ8N5I3 272 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 C8orf49Q96NF6 230 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 UPK3BQ9BT76 320 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 SDF2L1Q9HCN8 221 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 MRPS16Q9Y3D3 137 aaKnown RBP7.73□□□□□ -1.17
CKS1B-206ENST00000474215 ICOSQ9Y6W8 199 aa7.73□□□□□ -1.17
CKS1B-206ENST00000474215 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 M0R2P5 195 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 GCGP01275 180 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 IFNA7P01567 189 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 TYMSP04818 313 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 FGF8P55075 233 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-206ENST00000474215 UBE2G2P60604 165 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 ZNF345Q14585 488 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 SMUG1Q53HV7 270 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 C6orf223Q8N319 242 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 TMEM75Q8N9X5 138 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 ZNF479Q96JC4 524 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 LINC00479Q96M42 142 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 NKX6-2Q9C056 277 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-206ENST00000474215 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
CKS1B-206ENST00000474215 HECTD4Q9Y4D8 3996 aa7.71□□□□□ -1.17
CKS1B-206ENST00000474215 DNAH2Q9P225 4427 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 MAP1LC3B2A6NCE7 125 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 FAM74A7A6NL05 159 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 HMSDA8MTL9 139 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 PFN1P07737 140 aaKnown RBP7.71□□□□□ -1.18
CKS1B-206ENST00000474215 SFTA3P0C7M3 94 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 MRPL23Q16540 153 aaKnown RBP7.71□□□□□ -1.18
CKS1B-206ENST00000474215 ZFP69Q49AA0 526 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 TTC32Q5I0X7 151 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 OR4C5Q8NGB2 326 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 OR11H4Q8NGC9 324 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 MAP1LC3BQ9GZQ8 125 aa7.71□□□□□ -1.18
CKS1B-206ENST00000474215 TRAV4A0A0B4J268 109 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 TRAV34A0A0B4J273 112 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 A0A0D9SG52 128 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 LCE2BO14633 110 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 PPT1P50897 306 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 LYPD5Q6UWN5 251 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 STOML3Q8TAV4 291 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 HIST1H2BAQ96A08 127 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 DNAH17Q9UFH2 4485 aa7.7□□□□□ -1.18
CKS1B-206ENST00000474215 MUC4Q99102 2169 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 A0A1W2PPQ1 181 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 PEX7O00628 323 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 ORM1P02763 201 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 SEC11BP0C7V7 166 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 FHITP49789 147 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 ZNF876PQ49A33 203 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 NEGR1Q7Z3B1 354 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 KRTAP1-5Q9BYS1 174 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 ARL2-SNX15V9GYD0 113 aa7.69□□□□□ -1.18
CKS1B-206ENST00000474215 KANTRA0A1W2PQU2 76 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 FABP5P3A8MUU1 101 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 UMAD1C9J7I0 102 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 C9JCJ5 164 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 K7EQD1 137 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 SIVA1O15304 175 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 BCL2L11O43521 198 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 GYPEP15421 78 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 TNP2Q05952 138 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 SFT2D1Q8WV19 159 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 PCNPQ8WW12 178 aaKnown RBP7.68□□□□□ -1.18
CKS1B-206ENST00000474215 ZNF471Q9BX82 626 aaPredicted RBP7.68□□□□□ -1.18
CKS1B-206ENST00000474215 FAT2Q9NYQ8 4349 aa7.68□□□□□ -1.18
CKS1B-206ENST00000474215 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 NXPH4O95158 308 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 BTF3P20290 206 aaKnown RBP7.67□□□□□ -1.18
CKS1B-206ENST00000474215 SRIP30626 198 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 EIF5AP63241 154 aaKnown RBP7.67□□□□□ -1.18
CKS1B-206ENST00000474215 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 Q86TA4 180 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 FAM213BQ8TBF2 198 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 MBD3L1Q8WWY6 194 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 PTH2Q96A98 100 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 C9orf85Q96MD7 179 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 TCEAL7Q9BRU2 100 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 ZFP30Q9Y2G7 519 aa7.67□□□□□ -1.18
CKS1B-206ENST00000474215 IGKV3D-20A0A0C4DH25 116 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 PGPEP1LA6NFU8 196 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 RS1O15537 224 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 CIDEAO60543 219 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 PAGE4O60829 102 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 PFDN1O60925 122 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 RNASE3P12724 160 aaKnown RBP7.66□□□□□ -1.18
CKS1B-206ENST00000474215 GATA1P15976 413 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-206ENST00000474215 CFAP126Q5VTH2 177 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 DPPA3Q6W0C5 159 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 TMUB2Q71RG4 321 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 COX8CQ7Z4L0 72 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 FMC1Q96HJ9 113 aa7.66□□□□□ -1.18
CKS1B-206ENST00000474215 TXNDC17Q9BRA2 123 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms