RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 IGHV3-30-3P0DP02 117 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 COX6B1P14854 86 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 ZNF22P17026 224 aaPredicted RBP2.86□□□□□ -1.95
SEC22A-204ENST00000473494 NPPCP23582 126 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 FKBP2P26885 142 aaKnown RBP2.86□□□□□ -1.95
SEC22A-204ENST00000473494 SRIP30626 198 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 LPAR6P43657 344 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 GABRA2P47869 451 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 CCL20P78556 96 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 FOXF1Q12946 379 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 AMTNQ6UX39 209 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 SSX8Q7RTT4 187 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 LINC00471Q8N535 108 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 FNDC9Q8TBE3 224 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 DNAJC9Q8WXX5 260 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 H1FXQ92522 213 aaKnown RBP2.86□□□□□ -1.95
SEC22A-204ENST00000473494 C11orf1Q9H5F2 150 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 COPZ2Q9P299 210 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 LAMTOR3Q9UHA4 124 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 AP4S1Q9Y587 144 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 ANKRD17O75179 2603 aaKnown RBP2.86□□□□□ -1.95
SEC22A-204ENST00000473494 F8P00451 2351 aa2.86□□□□□ -1.95
SEC22A-204ENST00000473494 ACANP16112 2415 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIVEP2P31629 2446 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 CADP27708 2225 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 ANKHD1Q8IWZ3 2542 aaKnown RBP2.85□□□□□ -1.95
SEC22A-204ENST00000473494 A0A087WUU8 490 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 TRAV38-1A0A0B4J264 116 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 TMEM189A5PLL7 270 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 C5orf58C9J3I9 102 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 SLC25A20O43772 301 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 IFNA10P01566 189 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST1H2BOP23527 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST1H2BBP33778 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 ZNF80P51504 273 aaPredicted RBP2.85□□□□□ -1.95
SEC22A-204ENST00000473494 DSCR4P56555 118 aaPredicted RBP2.85□□□□□ -1.95
SEC22A-204ENST00000473494 SMIM11AP58511 58 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST1H2BDP58876 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 TSPEAR-AS2P59090 65 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST1H2BCP62807 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 PSG9Q00887 426 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST2H2BEQ16778 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.85□□□□□ -1.95
SEC22A-204ENST00000473494 LYRM7Q5U5X0 104 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 CANT1Q8WVQ1 401 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST1H2BHQ93079 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 CARD19Q96LW7 228 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST1H2BNQ99877 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HIST1H2BMQ99879 126 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 OR2J1Q9GZK6 312 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 HSPB8Q9UJY1 196 aa2.85□□□□□ -1.95
SEC22A-204ENST00000473494 ITPR3Q14573 2671 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 A0A1B0GV90 55 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 LOC102725191A0A1B0GVB3 256 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 E7EQL1 145 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 TRAPPC2LH3BP13 241 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 ZNF73O43830 326 aaPredicted RBP2.84□□□□□ -1.95
SEC22A-204ENST00000473494 TPST1O60507 370 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 APOC1P02654 83 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 PRM2P04554 102 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 TSPAN19P0C672 248 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 RPL30P62888 115 aaKnown RBP2.84□□□□□ -1.95
SEC22A-204ENST00000473494 AADACL3Q5VUY0 350 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 RPL22L1Q6P5R6 122 aaKnown RBP2.84□□□□□ -1.95
SEC22A-204ENST00000473494 LCA10Q71F78 164 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 SPATA12Q7Z6I5 190 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 CNEP1R1Q8N9A8 125 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 OR5A1Q8NGJ0 315 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 UPK3BQ9BT76 320 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 RTL8AQ9BWD3 113 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 IL36BQ9NZH7 164 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 FUT9Q9Y231 359 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 MED31Q9Y3C7 131 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 DSCAMO60469 2012 aa2.84□□□□□ -1.95
SEC22A-204ENST00000473494 USF3Q68DE3 2245 aa2.84□□□□□ -1.96
SEC22A-204ENST00000473494 DNHD1Q96M86 4753 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 DEFB108AA8MXU0 73 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 H7BYZ3 331 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 NDUFB2O95178 105 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 CTSGP08311 255 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 UBBP0CG47 229 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 FUSP35637 526 aaKnown RBP eCLIP2.83□□□□□ -1.96
SEC22A-204ENST00000473494 RPL27AP46776 148 aaKnown RBP2.83□□□□□ -1.96
SEC22A-204ENST00000473494 CSN1S1P47710 185 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 MORN2Q502X0 79 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 HRCT1Q6UXD1 115 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 LRRC28Q86X40 367 aaPredicted RBP2.83□□□□□ -1.96
SEC22A-204ENST00000473494 TMEM229BQ8NBD8 167 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 OR10P1Q8NGE3 313 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 OR5C1Q8NGR4 320 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 RPS4Y2Q8TD47 263 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 GPX7Q96SL4 187 aaPredicted RBP2.83□□□□□ -1.96
SEC22A-204ENST00000473494 SMR3AQ99954 134 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 DERL1Q9BUN8 251 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 TUBA4BQ9H853 241 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 CACYBPQ9HB71 228 aaKnown RBP2.83□□□□□ -1.96
SEC22A-204ENST00000473494 TRAPPC2LQ9UL33 140 aa2.83□□□□□ -1.96
SEC22A-204ENST00000473494 LAMTOR2Q9Y2Q5 125 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms