RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
SCAMP4-207ENST00000472442 TMEM160Q9NX00 188 aa10.2□□□□□ -0.78
SCAMP4-207ENST00000472442 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
SCAMP4-207ENST00000472442 TRAV40A0A0B4J280 105 aa10.19□□□□□ -0.78
SCAMP4-207ENST00000472442 F8W735 103 aaPredicted RBP10.19□□□□□ -0.78
SCAMP4-207ENST00000472442 BMI1P35226 326 aa10.19□□□□□ -0.78
SCAMP4-207ENST00000472442 PDE6HQ13956 83 aa10.19□□□□□ -0.78
SCAMP4-207ENST00000472442 PSMG4Q5JS54 123 aa10.19□□□□□ -0.78
SCAMP4-207ENST00000472442 IGFL4Q6B9Z1 124 aa10.19□□□□□ -0.78
SCAMP4-207ENST00000472442 EPG5Q9HCE0 2579 aa10.19□□□□□ -0.78
SCAMP4-207ENST00000472442 ORM1P02763 201 aa10.18□□□□□ -0.78
SCAMP4-207ENST00000472442 INSL3P51460 131 aa10.18□□□□□ -0.78
SCAMP4-207ENST00000472442 C12orf74Q32Q52 190 aa10.18□□□□□ -0.78
SCAMP4-207ENST00000472442 ZNF575Q86XF7 245 aa10.18□□□□□ -0.78
SCAMP4-207ENST00000472442 NXT2Q9NPJ8 142 aaKnown RBP10.18□□□□□ -0.78
SCAMP4-207ENST00000472442 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
SCAMP4-207ENST00000472442 MRPL35Q9NZE8 188 aaKnown RBP10.18□□□□□ -0.78
SCAMP4-207ENST00000472442 RAB9AP51151 201 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 BRD3OSQ6XYD6 125 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 ATP5LO75964 103 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 PPIFP30405 207 aaKnown RBP10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 ATP5G2Q06055 141 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 LINC01548A6NM66 108 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 HLA-DMBP28068 263 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 GAGE13Q4V321 117 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 COX8CQ7Z4L0 72 aa10.17□□□□□ -0.78
SCAMP4-207ENST00000472442 IGHV1-69DA0A0B4J2H0 117 aa10.16□□□□□ -0.78
SCAMP4-207ENST00000472442 IGHV1-69P01742 117 aa10.16□□□□□ -0.78
SCAMP4-207ENST00000472442 HIST1H4GQ99525 98 aa10.16□□□□□ -0.78
SCAMP4-207ENST00000472442 IGHV3-23P01764 117 aa10.16□□□□□ -0.78
SCAMP4-207ENST00000472442 CKS1BP61024 79 aa10.16□□□□□ -0.78
SCAMP4-207ENST00000472442 LRRK2Q5S007 2527 aa10.16□□□□□ -0.78
SCAMP4-207ENST00000472442 ATP6V0E1O15342 81 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 IGHV4-38-2P0DP08 117 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 PRO0461Q9UI25 63 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 FAM208BQ5VWN6 2430 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 RRN3P1Q2M238 152 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 LCNL1Q6ZST4 164 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 TMEM219Q86XT9 240 aa10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 ZNF48Q96MX3 618 aaPredicted RBP10.15□□□□□ -0.78
SCAMP4-207ENST00000472442 MFAP4P55083 255 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 Q8N8P6 123 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 ZNF502Q8TBZ5 544 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 CNFNQ9BYD5 112 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 C21orf62Q9NYP8 219 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 AGRNO00468 2067 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 C5orf56Q8N8D9 126 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 MSMBP08118 114 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 TAL2Q16559 108 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
SCAMP4-207ENST00000472442 IGLV2-18A0A075B6J9 118 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 A0A1B0GWB2 263 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 G3V318 75 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 LINC01559Q495D7 138 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 SVIPQ8NHG7 77 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 WFDC12Q8WWY7 111 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 PSMG3-AS1Q96PY0 264 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 C20orf78Q9BR46 151 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 IGHG4P01861 327 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 TRGV3P03979 118 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 FAM110DQ8TAY7 271 aaPredicted RBP10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 MYOZ3Q8TDC0 251 aa10.13□□□□□ -0.79
SCAMP4-207ENST00000472442 AVPP01185 164 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 CTSGP08311 255 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 ERCC8Q13216 396 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 KLK9Q2XQG4 91 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 KLK9Q9UKQ9 250 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 CENPEQ02224 2701 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 TRBV7-3A0A075B6L6 115 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 IGHV3OR16-8A0A075B7F1 116 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 TRAV26-2A0A0B4J265 109 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 APOMO95445 188 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 COX6B1P14854 86 aa10.12□□□□□ -0.79
SCAMP4-207ENST00000472442 A0A087WX48 190 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 TCTEX1D4Q5JR98 221 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 SMAD5-AS1Q9Y6J3 95 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 POLQO75417 2590 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 TRAV26-1A0A087WT03 109 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 HIF1ANQ9NWT6 349 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 SCGB2A2Q13296 93 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 LAGE3Q14657 143 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 C15orf32Q32M92 178 aa10.11□□□□□ -0.79
SCAMP4-207ENST00000472442 A0A096LNT2 108 aa10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 KRTAP10-9P60411 292 aa10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 SRSF2Q01130 221 aaKnown RBP10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 MRAP2Q96G30 205 aa10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 CYSLTR1Q9Y271 337 aa10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 UFC1Q9Y3C8 167 aa10.1□□□□□ -0.79
SCAMP4-207ENST00000472442 NBPF19A0A087WUL8 3843 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 B4DSR2 109 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 DSCR9P59020 149 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 IL17RELQ6ZVW7 336 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms