RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 LGALS9BQ3B8N2 356 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 C18orf15Q96N68 181 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 SPXQ9BT56 116 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 SDF2L1Q9HCN8 221 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 NAGKQ9UJ70 344 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 BLOC1S1P78537 153 aa10.79□□□□□ -0.68
SDC3-203ENST00000471567 LGALS9CQ6DKI2 356 aa10.79□□□□□ -0.68
SDC3-203ENST00000471567 ALKAL2Q6UX46 152 aa10.79□□□□□ -0.68
SDC3-203ENST00000471567 Q6ZTI0 123 aa10.79□□□□□ -0.68
SDC3-203ENST00000471567 MDFICQ9P1T7 246 aa10.79□□□□□ -0.68
SDC3-203ENST00000471567 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
SDC3-203ENST00000471567 PLECQ15149 4684 aaKnown RBP10.79□□□□□ -0.68
SDC3-203ENST00000471567 TRGV1A0A0A0MS02 117 aa10.78□□□□□ -0.68
SDC3-203ENST00000471567 SCO2A0A1W2PP80 73 aa10.78□□□□□ -0.68
SDC3-203ENST00000471567 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
SDC3-203ENST00000471567 F5H768 121 aa10.78□□□□□ -0.68
SDC3-203ENST00000471567 GNRH2O43555 120 aa10.78□□□□□ -0.68
SDC3-203ENST00000471567 LTAP01374 205 aa10.78□□□□□ -0.68
SDC3-203ENST00000471567 IFNA1P01562 189 aa10.78□□□□□ -0.68
SDC3-203ENST00000471567 TAGLN2P37802 199 aaKnown RBP10.78□□□□□ -0.68
SDC3-203ENST00000471567 TRGV2A0A075B6R0 118 aa10.77□□□□□ -0.69
SDC3-203ENST00000471567 IGHV3-16A0A0C4DH30 117 aa10.77□□□□□ -0.69
SDC3-203ENST00000471567 LY6G6CO95867 125 aa10.77□□□□□ -0.69
SDC3-203ENST00000471567 TYMSP04818 313 aa10.77□□□□□ -0.69
SDC3-203ENST00000471567 C11orf52Q96A22 123 aa10.77□□□□□ -0.69
SDC3-203ENST00000471567 C11orf21Q9P2W6 132 aa10.77□□□□□ -0.69
SDC3-203ENST00000471567 TMEM88Q6PEY1 159 aa10.76□□□□□ -0.69
SDC3-203ENST00000471567 ZC2HC1AQ96GY0 325 aa10.76□□□□□ -0.69
SDC3-203ENST00000471567 PDE6DO43924 150 aa10.75□□□□□ -0.69
SDC3-203ENST00000471567 BCL2P10415 239 aa10.75□□□□□ -0.69
SDC3-203ENST00000471567 MEF2BQ02080 365 aaPredicted RBP10.75□□□□□ -0.69
SDC3-203ENST00000471567 C15orf53Q8NAA6 179 aa10.75□□□□□ -0.69
SDC3-203ENST00000471567 RASL10AQ92737 203 aa10.75□□□□□ -0.69
SDC3-203ENST00000471567 MRPL16Q9NX20 251 aaKnown RBP10.75□□□□□ -0.69
SDC3-203ENST00000471567 VAX2Q9UIW0 290 aa10.75□□□□□ -0.69
SDC3-203ENST00000471567 LYSTQ99698 3801 aa10.75□□□□□ -0.69
SDC3-203ENST00000471567 M0R2P5 195 aa10.74□□□□□ -0.69
SDC3-203ENST00000471567 CRIP1P50238 77 aa10.74□□□□□ -0.69
SDC3-203ENST00000471567 ZNF674Q2M3X9 581 aa10.74□□□□□ -0.69
SDC3-203ENST00000471567 FAM162BQ5T6X4 162 aa10.74□□□□□ -0.69
SDC3-203ENST00000471567 BAGE2Q86Y30 109 aa10.74□□□□□ -0.69
SDC3-203ENST00000471567 LYPD6BQ8NI32 183 aa10.74□□□□□ -0.69
SDC3-203ENST00000471567 ALMS1Q8TCU4 4167 aa10.73□□□□□ -0.69
SDC3-203ENST00000471567 IGKV3D-20A0A0C4DH25 116 aa10.73□□□□□ -0.69
SDC3-203ENST00000471567 P0DMU3 169 aa10.73□□□□□ -0.69
SDC3-203ENST00000471567 FAM231AP0DMU4 169 aa10.73□□□□□ -0.69
SDC3-203ENST00000471567 FAM231CP0DMU5 169 aa10.73□□□□□ -0.69
SDC3-203ENST00000471567 RPL35P42766 123 aaKnown RBP10.73□□□□□ -0.69
SDC3-203ENST00000471567 OR5I1Q13606 314 aa10.73□□□□□ -0.69
SDC3-203ENST00000471567 MLST8Q9BVC4 326 aa10.73□□□□□ -0.69
SDC3-203ENST00000471567 SACSQ9NZJ4 4579 aa10.72□□□□□ -0.69
SDC3-203ENST00000471567 H3BNG1 76 aa10.72□□□□□ -0.69
SDC3-203ENST00000471567 SH2D1AO60880 128 aa10.72□□□□□ -0.69
SDC3-203ENST00000471567 ORM1P02763 201 aa10.72□□□□□ -0.69
SDC3-203ENST00000471567 HOXA5P20719 270 aa10.72□□□□□ -0.69
SDC3-203ENST00000471567 PTH2Q96A98 100 aa10.72□□□□□ -0.69
SDC3-203ENST00000471567 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
SDC3-203ENST00000471567 B4DEV8 164 aa10.71□□□□□ -0.69
SDC3-203ENST00000471567 SLAQ13239 276 aa10.71□□□□□ -0.69
SDC3-203ENST00000471567 DNLZQ5SXM8 178 aa10.71□□□□□ -0.69
SDC3-203ENST00000471567 MUC4Q99102 2169 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 TRAV26-1A0A087WT03 109 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 KRBOX1C9JBD0 128 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 RNASE3P12724 160 aaKnown RBP10.7□□□□□ -0.7
SDC3-203ENST00000471567 S100A4P26447 101 aaKnown RBP10.7□□□□□ -0.7
SDC3-203ENST00000471567 ASIPP42127 132 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 SMIM12Q96EX1 92 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 DERL1Q9BUN8 251 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 MED9Q9NWA0 146 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 DNAH1Q9P2D7 4330 aa10.7□□□□□ -0.7
SDC3-203ENST00000471567 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
SDC3-203ENST00000471567 RBFOX3A6NFN3 312 aa10.69□□□□□ -0.7
SDC3-203ENST00000471567 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
SDC3-203ENST00000471567 RYR2Q92736 4967 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 RYR3Q15413 4870 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 M0R036 132 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 NUDT3O95989 172 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 IGHV3-53P01767 116 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 FHL2Q14192 279 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 RNF212Q495C1 297 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 ZNF876PQ49A33 203 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 CENPWQ5EE01 88 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 ZNF506Q5JVG8 444 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 PIK3CD-AS1Q5SR53 167 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 TEX261Q6UWH6 196 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 IL36BQ9NZH7 164 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
SDC3-203ENST00000471567 A0A0J9YY99 117 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 RAB19A4D1S5 217 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 C9JCJ5 164 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 CIDEAO60543 219 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 NDUFS6O75380 124 aaKnown RBP10.67□□□□□ -0.7
SDC3-203ENST00000471567 GNG4P50150 75 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 OR4C5Q8NGB2 326 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 VSIG2Q96IQ7 327 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms