RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MSRB1Q9NZV6 116 aa9□□□□□ -0.97
CPSF4-210ENST00000469897 TRAV4A0A0B4J268 109 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 TRAV21A0A0B4J279 112 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 A6NHS1 94 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 F6UZH7 168 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 M0R2P5 195 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 XGP55808 180 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 RAB2AP61019 212 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 GNG5P63218 68 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 OR10G9Q8NGN4 311 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 OR10G7Q8NGN6 311 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 PTTG2Q9NZH5 202 aa8.99□□□□□ -0.97
CPSF4-210ENST00000469897 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
CPSF4-210ENST00000469897 C9JCJ5 164 aa8.98□□□□□ -0.97
CPSF4-210ENST00000469897 TYMSP04818 313 aa8.98□□□□□ -0.97
CPSF4-210ENST00000469897 KRTAP10-1P60331 282 aa8.98□□□□□ -0.97
CPSF4-210ENST00000469897 PQLC2Q6ZP29 291 aa8.98□□□□□ -0.97
CPSF4-210ENST00000469897 TXNDC17Q9BRA2 123 aa8.98□□□□□ -0.97
CPSF4-210ENST00000469897 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
CPSF4-210ENST00000469897 DEFA1P59665 94 aa8.97□□□□□ -0.97
CPSF4-210ENST00000469897 DEFA3P59666 94 aa8.97□□□□□ -0.97
CPSF4-210ENST00000469897 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
CPSF4-210ENST00000469897 K7EP13 123 aa8.96□□□□□ -0.98
CPSF4-210ENST00000469897 CRYGDP07320 174 aa8.96□□□□□ -0.98
CPSF4-210ENST00000469897 ZNF876PQ49A33 203 aa8.96□□□□□ -0.98
CPSF4-210ENST00000469897 ARL6IP6Q8N6S5 226 aa8.96□□□□□ -0.98
CPSF4-210ENST00000469897 NHLRC2Q8NBF2 726 aa8.96□□□□□ -0.98
CPSF4-210ENST00000469897 ASB13Q8WXK3 278 aa8.96□□□□□ -0.98
CPSF4-210ENST00000469897 KCNS1Q96KK3 526 aa8.96□□□□□ -0.98
CPSF4-210ENST00000469897 IGHV3-73A0A0B4J1V6 119 aa8.95□□□□□ -0.98
CPSF4-210ENST00000469897 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
CPSF4-210ENST00000469897 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
CPSF4-210ENST00000469897 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
CPSF4-210ENST00000469897 C11orf21Q9P2W6 132 aa8.95□□□□□ -0.98
CPSF4-210ENST00000469897 PPT1P50897 306 aa8.94□□□□□ -0.98
CPSF4-210ENST00000469897 SUMO1P63165 101 aaKnown RBP8.94□□□□□ -0.98
CPSF4-210ENST00000469897 DPPA3Q6W0C5 159 aa8.94□□□□□ -0.98
CPSF4-210ENST00000469897 SH2D6Q7Z4S9 175 aa8.94□□□□□ -0.98
CPSF4-210ENST00000469897 SLC25A29Q8N8R3 303 aa8.94□□□□□ -0.98
CPSF4-210ENST00000469897 HSD17B11Q8NBQ5 300 aa8.94□□□□□ -0.98
CPSF4-210ENST00000469897 RAB24Q969Q5 203 aa8.94□□□□□ -0.98
CPSF4-210ENST00000469897 NDFIP1Q9BT67 221 aa8.94□□□□□ -0.98
CPSF4-210ENST00000469897 IGHV3-38A0A0C4DH36 116 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 FBLL1A6NHQ2 334 aaKnown RBP8.93□□□□□ -0.98
CPSF4-210ENST00000469897 TAAR5O14804 337 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 RS1O15537 224 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-210ENST00000469897 TCRAP04437 139 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 PFN1P07737 140 aaKnown RBP8.93□□□□□ -0.98
CPSF4-210ENST00000469897 STAG3L2P0CL84 134 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 STAG3L3P0CL85 134 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 GCSHP23434 173 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 CDC34P49427 236 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-210ENST00000469897 CFAP126Q5VTH2 177 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 C10orf126Q8N4M7 172 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 TMEM75Q8N9X5 138 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 PSG8Q9UQ74 426 aa8.93□□□□□ -0.98
CPSF4-210ENST00000469897 PGPEP1LA6NFU8 196 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 PSCAO43653 123 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 GCGP01275 180 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 IGLV2-11P01706 119 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 GCHFRP30047 84 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 TIRAPP58753 221 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 PRNTQ86SH4 94 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 SUN5Q8TC36 379 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 EPDR1Q9UM22 224 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
CPSF4-210ENST00000469897 TRAV8-6A0A0B4J262 113 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 SERTM2A0A1B0GWG4 89 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 TRBV6-4A0A1B0GX49 114 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 K7EQM0 130 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 ATP6V0CP27449 155 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 OR10J3Q5JRS4 329 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 C5orf17Q8NAS9 161 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 OR2G3Q8NGZ4 309 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 LINC00479Q96M42 142 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 PRADC1Q9BSG0 188 aa8.91□□□□□ -0.98
CPSF4-210ENST00000469897 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 CIDEAO60543 219 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 IGHV3-30P01768 117 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 IGHV3-33P01772 117 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 IGHV3-30-3P0DP02 117 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 IGHV3-30-5P0DP03 117 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 FLI1Q01543 452 aaPredicted RBP8.9□□□□□ -0.98
CPSF4-210ENST00000469897 SMUG1Q53HV7 270 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 Q5BKY6 102 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 LINC01556Q5JQF7 62 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 Q6ZSN1 163 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 FRZBQ92765 325 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 C9orf85Q96MD7 179 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 PSMG3Q9BT73 122 aaPredicted RBP8.9□□□□□ -0.98
CPSF4-210ENST00000469897 Q9HAA7 133 aa8.9□□□□□ -0.98
CPSF4-210ENST00000469897 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 CXorf1O96002 111 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 MBP02144 154 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 RNASE3P12724 160 aaKnown RBP8.89□□□□□ -0.99
CPSF4-210ENST00000469897 HAMPP81172 84 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms