RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 PCNPQ8WW12 178 aaKnown RBP13.6□□□□□ -0.23
USP11-205ENST00000467378 PDE6DO43924 150 aa13.59□□□□□ -0.23
USP11-205ENST00000467378 MED14OSP0DP75 135 aa13.59□□□□□ -0.23
USP11-205ENST00000467378 TDRG1Q3Y452 100 aa13.59□□□□□ -0.23
USP11-205ENST00000467378 TIMM8BQ9Y5J9 83 aaPredicted RBP13.59□□□□□ -0.23
USP11-205ENST00000467378 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 LYRM9A8MSI8 78 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 PFN1P07737 140 aaKnown RBP13.58□□□□□ -0.24
USP11-205ENST00000467378 CRIP1P50238 77 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 ZNF506Q5JVG8 444 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 FAM159AQ6UWV7 190 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 ZNF767PQ75MW2 155 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 TMEM183AQ8IXX5 376 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 ZC2HC1AQ96GY0 325 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 DERL1Q9BUN8 251 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 C11orf21Q9P2W6 132 aa13.58□□□□□ -0.24
USP11-205ENST00000467378 RPL35P42766 123 aaKnown RBP13.57□□□□□ -0.24
USP11-205ENST00000467378 IBA57Q5T440 356 aaKnown RBP13.57□□□□□ -0.24
USP11-205ENST00000467378 Q6ZTC4 211 aa13.57□□□□□ -0.24
USP11-205ENST00000467378 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
USP11-205ENST00000467378 MLST8Q9BVC4 326 aa13.57□□□□□ -0.24
USP11-205ENST00000467378 NOP10Q9NPE3 64 aaKnown RBP13.57□□□□□ -0.24
USP11-205ENST00000467378 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
USP11-205ENST00000467378 FABP5P3A8MUU1 101 aa13.56□□□□□ -0.24
USP11-205ENST00000467378 SNURFLB1AK76 121 aa13.56□□□□□ -0.24
USP11-205ENST00000467378 GNRH2O43555 120 aa13.56□□□□□ -0.24
USP11-205ENST00000467378 BAGE2Q86Y30 109 aa13.56□□□□□ -0.24
USP11-205ENST00000467378 FAM210AQ96ND0 272 aa13.56□□□□□ -0.24
USP11-205ENST00000467378 MED9Q9NWA0 146 aa13.56□□□□□ -0.24
USP11-205ENST00000467378 NAGKQ9UJ70 344 aa13.56□□□□□ -0.24
USP11-205ENST00000467378 TCL1AP56279 114 aa13.55□□□□□ -0.24
USP11-205ENST00000467378 DAZ2Q13117 558 aaKnown RBP13.55□□□□□ -0.24
USP11-205ENST00000467378 NHLRC2Q8NBF2 726 aa13.55□□□□□ -0.24
USP11-205ENST00000467378 KCNS1Q96KK3 526 aa13.55□□□□□ -0.24
USP11-205ENST00000467378 MDFICQ9P1T7 246 aa13.55□□□□□ -0.24
USP11-205ENST00000467378 ABCA13Q86UQ4 5058 aa13.55□□□□□ -0.24
USP11-205ENST00000467378 RAB19A4D1S5 217 aa13.54□□□□□ -0.24
USP11-205ENST00000467378 TYMSP04818 313 aa13.54□□□□□ -0.24
USP11-205ENST00000467378 ZNF674Q2M3X9 581 aa13.54□□□□□ -0.24
USP11-205ENST00000467378 TOR2AQ5JU69 321 aa13.54□□□□□ -0.24
USP11-205ENST00000467378 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
USP11-205ENST00000467378 TRGV11A0A075B6L2 103 aa13.53□□□□□ -0.24
USP11-205ENST00000467378 DAD1P61803 113 aa13.53□□□□□ -0.24
USP11-205ENST00000467378 IFITM2Q01629 132 aa13.53□□□□□ -0.24
USP11-205ENST00000467378 ZNF415Q09FC8 603 aa13.53□□□□□ -0.24
USP11-205ENST00000467378 EIF5A2Q9GZV4 153 aaKnown RBP13.53□□□□□ -0.24
USP11-205ENST00000467378 SDF2L1Q9HCN8 221 aa13.53□□□□□ -0.24
USP11-205ENST00000467378 VPS13DQ5THJ4 4388 aa13.53□□□□□ -0.24
USP11-205ENST00000467378 IGKV3D-20A0A0C4DH25 116 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 IGHV3-16A0A0C4DH30 117 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 TMEM250H0YL14 139 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 SH2D1AO60880 128 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 NDUFS6O75380 124 aaKnown RBP13.52□□□□□ -0.25
USP11-205ENST00000467378 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 DEFB130BP0DP73 79 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 DEFB130AP0DP74 79 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 FAM162BQ5T6X4 162 aa13.52□□□□□ -0.25
USP11-205ENST00000467378 TRBV20OR9-2A0A075B6H5 130 aa13.51□□□□□ -0.25
USP11-205ENST00000467378 TRAV10A0A0B4J240 114 aa13.51□□□□□ -0.25
USP11-205ENST00000467378 SPINK4O60575 86 aa13.51□□□□□ -0.25
USP11-205ENST00000467378 CENPWQ5EE01 88 aa13.51□□□□□ -0.25
USP11-205ENST00000467378 Q6ZTI0 123 aa13.5□□□□□ -0.25
USP11-205ENST00000467378 LINC00336Q6ZUF6 198 aa13.5□□□□□ -0.25
USP11-205ENST00000467378 KRTAP4-5Q9BYR2 181 aa13.5□□□□□ -0.25
USP11-205ENST00000467378 DEFB131BA0A096LNP1 70 aa13.49□□□□□ -0.25
USP11-205ENST00000467378 KRBOX1C9JBD0 128 aa13.49□□□□□ -0.25
USP11-205ENST00000467378 SRP19P09132 144 aaKnown RBP13.49□□□□□ -0.25
USP11-205ENST00000467378 GNG4P50150 75 aa13.49□□□□□ -0.25
USP11-205ENST00000467378 ZNF575Q86XF7 245 aa13.49□□□□□ -0.25
USP11-205ENST00000467378 SMIM12Q96EX1 92 aa13.49□□□□□ -0.25
USP11-205ENST00000467378 SPXQ9BT56 116 aa13.49□□□□□ -0.25
USP11-205ENST00000467378 PARLQ9H300 379 aa13.49□□□□□ -0.25
USP11-205ENST00000467378 DNAH6Q9C0G6 4158 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 A0A1B0GVY2 172 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 GAGE12BA1L429 117 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 GAGE7O76087 117 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 ORM1P02763 201 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 GAGE12FP0CL80 117 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 GAGE12GP0CL81 117 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 GAGE12IP0CL82 117 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 LGALS9BQ3B8N2 356 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 LINC01559Q495D7 138 aa13.48□□□□□ -0.25
USP11-205ENST00000467378 TRGV1A0A0A0MS02 117 aa13.47□□□□□ -0.25
USP11-205ENST00000467378 B4DEV8 164 aa13.47□□□□□ -0.25
USP11-205ENST00000467378 C9JCJ5 164 aa13.47□□□□□ -0.25
USP11-205ENST00000467378 RAB14P61106 215 aa13.47□□□□□ -0.25
USP11-205ENST00000467378 M0R036 132 aa13.46□□□□□ -0.25
USP11-205ENST00000467378 RNASE3P12724 160 aaKnown RBP13.46□□□□□ -0.25
USP11-205ENST00000467378 SRSF3P84103 164 aaKnown RBP13.46□□□□□ -0.25
USP11-205ENST00000467378 DNLZQ5SXM8 178 aa13.46□□□□□ -0.25
USP11-205ENST00000467378 PRR27Q6MZM9 219 aa13.46□□□□□ -0.25
USP11-205ENST00000467378 C9orf85Q96MD7 179 aa13.46□□□□□ -0.25
USP11-205ENST00000467378 C18orf15Q96N68 181 aa13.46□□□□□ -0.25
USP11-205ENST00000467378 MRPL16Q9NX20 251 aaKnown RBP13.46□□□□□ -0.25
USP11-205ENST00000467378 C9JQL5 133 aa13.45□□□□□ -0.26
USP11-205ENST00000467378 ATP5G1P05496 136 aa13.45□□□□□ -0.26
USP11-205ENST00000467378 MGST1P10620 155 aaKnown RBP13.45□□□□□ -0.26
USP11-205ENST00000467378 HTN3P15516 51 aa13.45□□□□□ -0.26
USP11-205ENST00000467378 CLLU1Q5K131 121 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms