RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TIRAPP58753 221 aa15.36■□□□□ 0.05
USP42-205ENST00000465073 Q5VSD8 79 aa15.35■□□□□ 0.05
USP42-205ENST00000465073 RPH3ALQ9UNE2 315 aa15.35■□□□□ 0.05
USP42-205ENST00000465073 HERC1Q15751 4861 aa15.35■□□□□ 0.05
USP42-205ENST00000465073 DMBT1Q9UGM3 2413 aaPredicted RBP15.35■□□□□ 0.05
USP42-205ENST00000465073 MPC2O95563 127 aa15.34■□□□□ 0.05
USP42-205ENST00000465073 RPL12P30050 165 aaKnown RBP15.34■□□□□ 0.05
USP42-205ENST00000465073 PQLC2Q6ZP29 291 aa15.34■□□□□ 0.05
USP42-205ENST00000465073 GOLT1AQ6ZVE7 132 aa15.34■□□□□ 0.05
USP42-205ENST00000465073 SMIM3Q9BZL3 60 aa15.34■□□□□ 0.05
USP42-205ENST00000465073 IGHV3-38A0A0C4DH36 116 aa15.33■□□□□ 0.05
USP42-205ENST00000465073 LOC100131303A0A0U1RQF7 123 aa15.33■□□□□ 0.05
USP42-205ENST00000465073 NHLRC2Q8NBF2 726 aa15.33■□□□□ 0.05
USP42-205ENST00000465073 KCNS1Q96KK3 526 aa15.33■□□□□ 0.05
USP42-205ENST00000465073 SDF2L1Q9HCN8 221 aa15.33■□□□□ 0.05
USP42-205ENST00000465073 TREM1Q9NP99 234 aa15.33■□□□□ 0.05
USP42-205ENST00000465073 EIF3GO75821 320 aaKnown RBP eCLIP15.33■□□□□ 0.04
USP42-205ENST00000465073 TYMSP04818 313 aa15.33■□□□□ 0.04
USP42-205ENST00000465073 GATA1P15976 413 aaPredicted RBP15.33■□□□□ 0.04
USP42-205ENST00000465073 PPT1P50897 306 aa15.33■□□□□ 0.04
USP42-205ENST00000465073 ACOT6Q3I5F7 207 aaPredicted RBP15.33■□□□□ 0.04
USP42-205ENST00000465073 TVP23CQ96ET8 276 aa15.33■□□□□ 0.04
USP42-205ENST00000465073 BOLA1Q9Y3E2 137 aa15.33■□□□□ 0.04
USP42-205ENST00000465073 A0A1W2PPV4 95 aa15.32■□□□□ 0.04
USP42-205ENST00000465073 MARVELD1Q9BSK0 173 aa15.32■□□□□ 0.04
USP42-205ENST00000465073 F6UZH7 168 aa15.31■□□□□ 0.04
USP42-205ENST00000465073 PSCAO43653 123 aa15.31■□□□□ 0.04
USP42-205ENST00000465073 PFN1P07737 140 aaKnown RBP15.31■□□□□ 0.04
USP42-205ENST00000465073 LINC01556Q5JQF7 62 aa15.31■□□□□ 0.04
USP42-205ENST00000465073 ASB13Q8WXK3 278 aa15.31■□□□□ 0.04
USP42-205ENST00000465073 TRAV8-1A0A0A6YYK1 113 aa15.3■□□□□ 0.04
USP42-205ENST00000465073 SSNA1O43805 119 aa15.3■□□□□ 0.04
USP42-205ENST00000465073 IFITM3Q01628 133 aa15.3■□□□□ 0.04
USP42-205ENST00000465073 FAT1Q14517 4588 aa15.29■□□□□ 0.04
USP42-205ENST00000465073 FBLL1A6NHQ2 334 aaKnown RBP15.29■□□□□ 0.04
USP42-205ENST00000465073 CIDEAO60543 219 aa15.29■□□□□ 0.04
USP42-205ENST00000465073 NTN5Q8WTR8 489 aaPredicted RBP15.29■□□□□ 0.04
USP42-205ENST00000465073 WFDC1Q9HC57 220 aa15.29■□□□□ 0.04
USP42-205ENST00000465073 IGLV5-52A0A0A0MRZ9 124 aa15.28■□□□□ 0.04
USP42-205ENST00000465073 TRAV8-6A0A0B4J262 113 aa15.28■□□□□ 0.04
USP42-205ENST00000465073 LRCOL1A6NCL2 159 aa15.28■□□□□ 0.04
USP42-205ENST00000465073 IBA57-AS1B1ANH7 110 aa15.28■□□□□ 0.04
USP42-205ENST00000465073 SLC25A29Q8N8R3 303 aa15.28■□□□□ 0.04
USP42-205ENST00000465073 PRADC1Q9BSG0 188 aa15.28■□□□□ 0.04
USP42-205ENST00000465073 SMR3BP02814 79 aaPredicted RBP15.27■□□□□ 0.04
USP42-205ENST00000465073 GNG5P63218 68 aa15.27■□□□□ 0.04
USP42-205ENST00000465073 ZNF876PQ49A33 203 aa15.27■□□□□ 0.04
USP42-205ENST00000465073 NDFIP1Q9BT67 221 aa15.27■□□□□ 0.04
USP42-205ENST00000465073 SERTM2A0A1B0GWG4 89 aa15.27■□□□□ 0.03
USP42-205ENST00000465073 RAB2AP61019 212 aa15.27■□□□□ 0.03
USP42-205ENST00000465073 OR10G9Q8NGN4 311 aa15.27■□□□□ 0.03
USP42-205ENST00000465073 OR10G7Q8NGN6 311 aa15.27■□□□□ 0.03
USP42-205ENST00000465073 TMEM70Q9BUB7 260 aa15.27■□□□□ 0.03
USP42-205ENST00000465073 TRBV6-4A0A1B0GX49 114 aa15.26■□□□□ 0.03
USP42-205ENST00000465073 FAM229AH3BQW9 127 aa15.26■□□□□ 0.03
USP42-205ENST00000465073 RS1O15537 224 aa15.26■□□□□ 0.03
USP42-205ENST00000465073 OR10J3Q5JRS4 329 aa15.26■□□□□ 0.03
USP42-205ENST00000465073 SRRM2Q9UQ35 2752 aaKnown RBP15.25■□□□□ 0.03
USP42-205ENST00000465073 TAAR5O14804 337 aa15.25■□□□□ 0.03
USP42-205ENST00000465073 HMGB3O15347 200 aaKnown RBP15.25■□□□□ 0.03
USP42-205ENST00000465073 RHOHQ15669 191 aa15.25■□□□□ 0.03
USP42-205ENST00000465073 CFAP126Q5VTH2 177 aa15.25■□□□□ 0.03
USP42-205ENST00000465073 SGK494Q96LW2 274 aa15.24■□□□□ 0.03
USP42-205ENST00000465073 K7EQM0 130 aa15.23■□□□□ 0.03
USP42-205ENST00000465073 ARL14EPLP0DKL9 152 aa15.23■□□□□ 0.03
USP42-205ENST00000465073 C5orf17Q8NAS9 161 aa15.23■□□□□ 0.03
USP42-205ENST00000465073 PTH2Q96A98 100 aa15.23■□□□□ 0.03
USP42-205ENST00000465073 Q9HAA7 133 aa15.23■□□□□ 0.03
USP42-205ENST00000465073 C11orf21Q9P2W6 132 aa15.23■□□□□ 0.03
USP42-205ENST00000465073 ZNF80P51504 273 aaPredicted RBP15.22■□□□□ 0.03
USP42-205ENST00000465073 LELP1Q5T871 98 aa15.22■□□□□ 0.03
USP42-205ENST00000465073 DPPA3Q6W0C5 159 aa15.22■□□□□ 0.03
USP42-205ENST00000465073 Q8N814 137 aa15.22■□□□□ 0.03
USP42-205ENST00000465073 TCRAP04437 139 aa15.21■□□□□ 0.03
USP42-205ENST00000465073 CDC34P49427 236 aaPredicted RBP15.21■□□□□ 0.03
USP42-205ENST00000465073 DEFA1P59665 94 aa15.21■□□□□ 0.03
USP42-205ENST00000465073 DEFA3P59666 94 aa15.21■□□□□ 0.03
USP42-205ENST00000465073 C9orf85Q96MD7 179 aa15.21■□□□□ 0.03
USP42-205ENST00000465073 GTSF1LQ9H1H1 148 aa15.21■□□□□ 0.03
USP42-205ENST00000465073 FLG2Q5D862 2391 aaPredicted RBP15.21■□□□□ 0.02
USP42-205ENST00000465073 IGHV3-73A0A0B4J1V6 119 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 GCGP01275 180 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 STAG3L2P0CL84 134 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 STAG3L3P0CL85 134 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 HAMPP81172 84 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 ATP6V0E2Q8NHE4 81 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 SUN5Q8TC36 379 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 PSG8Q9UQ74 426 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 IGHV3-30P01768 117 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 IGHV3-33P01772 117 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 IGHV3-30-3P0DP02 117 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 IGHV3-30-5P0DP03 117 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 MGST1P10620 155 aaKnown RBP15.2■□□□□ 0.02
USP42-205ENST00000465073 OR2G3Q8NGZ4 309 aa15.2■□□□□ 0.02
USP42-205ENST00000465073 VPS13BQ7Z7G8 4022 aa15.19■□□□□ 0.02
USP42-205ENST00000465073 LAGE3Q14657 143 aa15.19■□□□□ 0.02
USP42-205ENST00000465073 SMUG1Q53HV7 270 aa15.19■□□□□ 0.02
USP42-205ENST00000465073 ZNF506Q5JVG8 444 aa15.19■□□□□ 0.02
USP42-205ENST00000465073 Q6ZSN1 163 aa15.19■□□□□ 0.02
USP42-205ENST00000465073 RAB24Q969Q5 203 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms