RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 TDRG1Q3Y452 100 aa11.41□□□□□ -0.58
CHKB-202ENST00000463053 HSD17B11Q8NBQ5 300 aa11.41□□□□□ -0.58
CHKB-202ENST00000463053 CYTL1Q9NRR1 136 aa11.41□□□□□ -0.58
CHKB-202ENST00000463053 TRGV4A0A0C4DH28 118 aa11.4□□□□□ -0.58
CHKB-202ENST00000463053 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.58
CHKB-202ENST00000463053 MRPL23Q16540 153 aaKnown RBP11.4□□□□□ -0.58
CHKB-202ENST00000463053 ARL6IP6Q8N6S5 226 aa11.4□□□□□ -0.58
CHKB-202ENST00000463053 ASB13Q8WXK3 278 aa11.4□□□□□ -0.58
CHKB-202ENST00000463053 SH3BGRL3Q9H299 93 aa11.4□□□□□ -0.58
CHKB-202ENST00000463053 K7EQD1 137 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 TYMSP04818 313 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 STAG3L3P0CL85 134 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 ATP6V0CP27449 155 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
CHKB-202ENST00000463053 FAM74A1Q5RGS3 127 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 RPL7L1Q6DKI1 246 aaKnown RBP11.39□□□□□ -0.59
CHKB-202ENST00000463053 OR2G3Q8NGZ4 309 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 TREM1Q9NP99 234 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 C11orf21Q9P2W6 132 aa11.39□□□□□ -0.59
CHKB-202ENST00000463053 TRAV21A0A0B4J279 112 aa11.38□□□□□ -0.59
CHKB-202ENST00000463053 ARPC5O15511 151 aa11.38□□□□□ -0.59
CHKB-202ENST00000463053 GYPEP15421 78 aa11.38□□□□□ -0.59
CHKB-202ENST00000463053 ZNF80P51504 273 aaPredicted RBP11.38□□□□□ -0.59
CHKB-202ENST00000463053 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
CHKB-202ENST00000463053 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
CHKB-202ENST00000463053 TRAV4A0A0B4J268 109 aa11.37□□□□□ -0.59
CHKB-202ENST00000463053 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
CHKB-202ENST00000463053 M0R2P5 195 aa11.37□□□□□ -0.59
CHKB-202ENST00000463053 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHKB-202ENST00000463053 GCHFRP30047 84 aa11.36□□□□□ -0.59
CHKB-202ENST00000463053 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
CHKB-202ENST00000463053 OR4C5Q8NGB2 326 aa11.36□□□□□ -0.59
CHKB-202ENST00000463053 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
CHKB-202ENST00000463053 FAT1Q14517 4588 aa11.36□□□□□ -0.59
CHKB-202ENST00000463053 IGLV2-11P01706 119 aa11.35□□□□□ -0.59
CHKB-202ENST00000463053 TCRAP04437 139 aa11.35□□□□□ -0.59
CHKB-202ENST00000463053 SRIP30626 198 aa11.35□□□□□ -0.59
CHKB-202ENST00000463053 MAPKAPK5-AS1Q8N8E1 139 aa11.35□□□□□ -0.59
CHKB-202ENST00000463053 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
CHKB-202ENST00000463053 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
CHKB-202ENST00000463053 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
CHKB-202ENST00000463053 TCTE3Q8IZS6 198 aa11.34□□□□□ -0.59
CHKB-202ENST00000463053 C5orf17Q8NAS9 161 aa11.34□□□□□ -0.59
CHKB-202ENST00000463053 SDF2L1Q9HCN8 221 aa11.34□□□□□ -0.59
CHKB-202ENST00000463053 PSG8Q9UQ74 426 aa11.34□□□□□ -0.59
CHKB-202ENST00000463053 ORM1P02763 201 aa11.33□□□□□ -0.6
CHKB-202ENST00000463053 GATA1P15976 413 aaPredicted RBP11.33□□□□□ -0.6
CHKB-202ENST00000463053 SERF2P84101 59 aa11.33□□□□□ -0.6
CHKB-202ENST00000463053 KCNRGQ8N5I3 272 aa11.33□□□□□ -0.6
CHKB-202ENST00000463053 TMEM75Q8N9X5 138 aa11.33□□□□□ -0.6
CHKB-202ENST00000463053 KCNS1Q96KK3 526 aa11.33□□□□□ -0.6
CHKB-202ENST00000463053 EPDR1Q9UM22 224 aa11.33□□□□□ -0.6
CHKB-202ENST00000463053 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
CHKB-202ENST00000463053 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
CHKB-202ENST00000463053 C9JCJ5 164 aa11.32□□□□□ -0.6
CHKB-202ENST00000463053 GCGP01275 180 aa11.32□□□□□ -0.6
CHKB-202ENST00000463053 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
CHKB-202ENST00000463053 PCNPQ8WW12 178 aaKnown RBP11.32□□□□□ -0.6
CHKB-202ENST00000463053 LY96Q9Y6Y9 160 aa11.32□□□□□ -0.6
CHKB-202ENST00000463053 HMSDA8MTL9 139 aa11.31□□□□□ -0.6
CHKB-202ENST00000463053 RS1O15537 224 aa11.31□□□□□ -0.6
CHKB-202ENST00000463053 MBP02144 154 aa11.31□□□□□ -0.6
CHKB-202ENST00000463053 DNAH10OSP0CZ25 163 aa11.31□□□□□ -0.6
CHKB-202ENST00000463053 LGALSLQ3ZCW2 172 aaPredicted RBP11.31□□□□□ -0.6
CHKB-202ENST00000463053 PRNTQ86SH4 94 aa11.31□□□□□ -0.6
CHKB-202ENST00000463053 LINC00479Q96M42 142 aa11.31□□□□□ -0.6
CHKB-202ENST00000463053 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
CHKB-202ENST00000463053 ACTR3CQ9C0K3 210 aaPredicted RBP11.31□□□□□ -0.6
CHKB-202ENST00000463053 PGPEP1LA6NFU8 196 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 CXorf1O96002 111 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
CHKB-202ENST00000463053 ZNF345Q14585 488 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 CFAP126Q5VTH2 177 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 Q8N1X5 172 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 C9orf85Q96MD7 179 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 TXNDC17Q9BRA2 123 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 TMEM167BQ9NRX6 74 aa11.3□□□□□ -0.6
CHKB-202ENST00000463053 A0A087WTM6 91 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 IGHV3-73A0A0B4J1V6 119 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 TAAR5O14804 337 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 PFN1P07737 140 aaKnown RBP11.29□□□□□ -0.6
CHKB-202ENST00000463053 ZNF876PQ49A33 203 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 SLC25A29Q8N8R3 303 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 INO80EQ8NBZ0 244 aaPredicted RBP11.29□□□□□ -0.6
CHKB-202ENST00000463053 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
CHKB-202ENST00000463053 TRAV9-2A0A087WT02 112 aa11.28□□□□□ -0.6
CHKB-202ENST00000463053 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
CHKB-202ENST00000463053 C1QBP02746 253 aa11.28□□□□□ -0.6
CHKB-202ENST00000463053 RNASE3P12724 160 aaKnown RBP11.28□□□□□ -0.6
CHKB-202ENST00000463053 NKX2-5P52952 324 aaPredicted RBP11.28□□□□□ -0.6
CHKB-202ENST00000463053 SMUG1Q53HV7 270 aa11.28□□□□□ -0.6
CHKB-202ENST00000463053 AKAP14Q86UN6 197 aa11.28□□□□□ -0.6
CHKB-202ENST00000463053 NFE4Q86UQ8 179 aa11.28□□□□□ -0.6
CHKB-202ENST00000463053 C9orf62Q8N4C0 152 aa11.28□□□□□ -0.6
CHKB-202ENST00000463053 SCRT2Q9NQ03 307 aa11.28□□□□□ -0.6
CHKB-202ENST00000463053 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms