RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 HNRNPKP61978 463 aaKnown RBP eCLIP16.91■□□□□ 0.32e-21■■■■■ 55.9
CHKB-202ENST00000463053 NCBP2P52298 156 aaKnown RBP eCLIP15.19■□□□□ 0.022e-12■■■■■ 41
CHKB-202ENST00000463053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.79■□□□□ 0.443e-12■■■■■ 64.6
CHKB-202ENST00000463053 SF3B4Q15427 424 aaKnown RBP eCLIP15.16■□□□□ 0.021e-11■■■■□ 21.2
CHKB-202ENST00000463053 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.14■□□□□ 0.813e-11■□□□□ 9.9
CHKB-202ENST00000463053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.95■■□□□ 1.263e-9■■□□□ 11.7
CHKB-202ENST00000463053 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.43□□□□□ -0.16e-9■■■□□ 19.1
CHKB-202ENST00000463053 PCBP2Q15366 365 aaKnown RBP eCLIP15.51■□□□□ 0.076e-9■■□□□ 11.9
CHKB-202ENST00000463053 AQRO60306 1485 aaKnown RBP eCLIP30.23■■■□□ 2.433e-8■■■■■ 28.1
CHKB-202ENST00000463053 PPIGQ13427 754 aaKnown RBP eCLIP19.48■□□□□ 0.715e-8■■□□□ 12.7
CHKB-202ENST00000463053 SMNDC1O75940 238 aaKnown RBP eCLIP15.04■□□□□ -06e-8■■■□□ 19.1
CHKB-202ENST00000463053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.99■■□□□ 1.758e-8■■■□□ 18.5
CHKB-202ENST00000463053 PABPN1Q86U42 306 aaKnown RBP eCLIP34.58■■■■□ 3.133e-7■□□□□ 8.9
CHKB-202ENST00000463053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.49■■□□□ 1.994e-7■■■□□ 18.4
CHKB-202ENST00000463053 RBFOX2O43251 390 aaKnown RBP eCLIP12.63□□□□□ -0.394e-7■□□□□ 9.1
CHKB-202ENST00000463053 PRPF4O43172 522 aaKnown RBP eCLIP15.84■□□□□ 0.135e-7■■□□□ 13.1
CHKB-202ENST00000463053 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.52■□□□□ 0.725e-7■■□□□ 13.4
CHKB-202ENST00000463053 SF3A3Q12874 501 aaKnown RBP eCLIP14.47□□□□□ -0.096e-7■■□□□ 13.8
CHKB-202ENST00000463053 EFTUD2Q15029 972 aaKnown RBP eCLIP15.63■□□□□ 0.097e-7■■■■□ 22.4
CHKB-202ENST00000463053 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.1■□□□□ 0.018e-7■■■■■ 32.1
CHKB-202ENST00000463053 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.99□□□□□ -0.011e-6■■■■□ 19.8
CHKB-202ENST00000463053 U2AF2P26368 475 aaKnown RBP eCLIP18.55■□□□□ 0.561e-6■■□□□ 13.5
CHKB-202ENST00000463053 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■■■■□ 22.2
CHKB-202ENST00000463053 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.38■□□□□ 0.053e-6■□□□□ 9.5
CHKB-202ENST00000463053 PCBP1Q15365 356 aaKnown RBP eCLIP18.56■□□□□ 0.563e-6■■■■■ 28.8
CHKB-202ENST00000463053 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.69■□□□□ 0.14e-6■□□□□ 8.2
CHKB-202ENST00000463053 LSM11P83369 360 aaKnown RBP eCLIP14.45□□□□□ -0.16e-6■□□□□ 10.9
Retrieved 27 of 27 RNA–protein pairs in 6.2 ms