RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 Q6AWC8 147 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 TCTE3Q8IZS6 198 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 Q8N1X5 172 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 C5orf17Q8NAS9 161 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 CMTM2Q8TAZ6 248 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 TMEM167BQ9NRX6 74 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 TP53TG3Q9ULZ0 132 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 LINC00588Q9Y4M8 146 aa5.51□□□□□ -1.53
CDC42BPA-210ENST00000462553 IGHV1OR15-1A0A075B7D0 117 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 A0A0D9SG52 128 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 A0A1W2PRE2 83 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 MAP1LC3B2A6NCE7 125 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 FAM74A7A6NL05 159 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 F6UZH7 168 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 TCRAP04437 139 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 TCL1AP56279 114 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 FAM74A1Q5RGS3 127 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 IBA57Q5T440 356 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 Q6ZTI0 123 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 TMUB2Q71RG4 321 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 CCDC28AQ8IWP9 274 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 ZNF680Q8NEM1 530 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 SGK494Q96LW2 274 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 ZNF471Q9BX82 626 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 MAP1LC3BQ9GZQ8 125 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 GSN-AS1Q9NRJ2 163 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 EPDR1Q9UM22 224 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 KLF12Q9Y4X4 402 aa5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 FLG2Q5D862 2391 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-210ENST00000462553 SERTM2A0A1B0GWG4 89 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 KANTRA0A1W2PQU2 76 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 GAGE12BA1L429 117 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 CBY3A6NI87 242 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 SNURFLB1AK76 121 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 RGS13O14921 159 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 SPINK4O60575 86 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 GAGE7O76087 117 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 ATP5G1P05496 136 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 SEC11BP0C7V7 166 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 GAGE12FP0CL80 117 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 GAGE12GP0CL81 117 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 GAGE12IP0CL82 117 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 HOXA5P20719 270 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 ATP5G3P48201 142 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 ZNF80P51504 273 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 KRTAP10-2P60368 255 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 UBE2G2P60604 165 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 SUMO1P63165 101 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 LGALSLQ3ZCW2 172 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 MUC21Q5SSG8 566 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 SPATA12Q7Z6I5 190 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 IQCF2Q8IXL9 164 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 TMEM75Q8N9X5 138 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 STOML3Q8TAV4 291 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 C8orf49Q96NF6 230 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 ATG101Q9BSB4 218 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 C11orf21Q9P2W6 132 aa5.49□□□□□ -1.53
CDC42BPA-210ENST00000462553 hCG_2014768A0A024R1R8 64 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 TRAV34A0A0B4J273 112 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 F5H768 121 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 PEX7O00628 323 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 NUDT3O95989 172 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 C1QBP02746 253 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 CYB561D1Q8N8Q1 229 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 MBD3L1Q8WWY6 194 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 LINC00479Q96M42 142 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 C18orf15Q96N68 181 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 TREM1Q9NP99 234 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 MDFICQ9P1T7 246 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 PSG8Q9UQ74 426 aa5.48□□□□□ -1.53
CDC42BPA-210ENST00000462553 TRGV1A0A0A0MS02 117 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 TRAV21A0A0B4J279 112 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 A0A1B0GVG6 124 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 UMAD1C9J7I0 102 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 GHRHP01286 108 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 TYMSP04818 313 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 CCL18P55774 89 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 FLI1Q01543 452 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 ZNF415Q09FC8 603 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 TMEM183BQ1AE95 376 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 TDRG1Q3Y452 100 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 Q86TA4 180 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 TMEM183AQ8IXX5 376 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 FAM213BQ8TBF2 198 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 SCRT2Q9NQ03 307 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 MRPL16Q9NX20 251 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 ARL2-SNX15V9GYD0 113 aa5.47□□□□□ -1.53
CDC42BPA-210ENST00000462553 IGHV3-16A0A0C4DH30 117 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 GNRH2O43555 120 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 PFDN1O60925 122 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 GCGP01275 180 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 TPT1P13693 172 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 DPPA3Q6W0C5 159 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 PRNTQ86SH4 94 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 AKAP14Q86UN6 197 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 C9orf62Q8N4C0 152 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 UPK3BQ9BT76 320 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 NAGKQ9UJ70 344 aa5.46□□□□□ -1.54
CDC42BPA-210ENST00000462553 TRGV11A0A075B6L2 103 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms