RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SFTA3P0C7M3 94 aa13.02□□□□□ -0.33
COL5A1-203ENST00000460264 ZNF726P1Q15940 193 aa13.02□□□□□ -0.33
COL5A1-203ENST00000460264 ZNF479Q96JC4 524 aa13.02□□□□□ -0.33
COL5A1-203ENST00000460264 SDF2L1Q9HCN8 221 aa13.02□□□□□ -0.33
COL5A1-203ENST00000460264 TRGV4A0A0C4DH28 118 aa13.01□□□□□ -0.33
COL5A1-203ENST00000460264 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
COL5A1-203ENST00000460264 TYMSP04818 313 aa13.01□□□□□ -0.33
COL5A1-203ENST00000460264 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
COL5A1-203ENST00000460264 IQCF2Q8IXL9 164 aa13.01□□□□□ -0.33
COL5A1-203ENST00000460264 EPDR1Q9UM22 224 aa13.01□□□□□ -0.33
COL5A1-203ENST00000460264 CTXND1A0A1B0GTU2 59 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 M0R2P5 195 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 MED14OSP0DP75 135 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 ZNF80P51504 273 aaPredicted RBP13□□□□□ -0.33
COL5A1-203ENST00000460264 ZNF575Q86XF7 245 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 KCNS1Q96KK3 526 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 PSG8Q9UQ74 426 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 DNAH11Q96DT5 4516 aa13□□□□□ -0.33
COL5A1-203ENST00000460264 ARPC5O15511 151 aa12.99□□□□□ -0.33
COL5A1-203ENST00000460264 FLI1Q01543 452 aaPredicted RBP12.99□□□□□ -0.33
COL5A1-203ENST00000460264 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
COL5A1-203ENST00000460264 TMEM75Q8N9X5 138 aa12.99□□□□□ -0.33
COL5A1-203ENST00000460264 C11orf21Q9P2W6 132 aa12.99□□□□□ -0.33
COL5A1-203ENST00000460264 DYNC1H1Q14204 4646 aaKnown RBP12.98□□□□□ -0.33
COL5A1-203ENST00000460264 TRAV4A0A0B4J268 109 aa12.98□□□□□ -0.33
COL5A1-203ENST00000460264 A0A1W2PRE2 83 aa12.98□□□□□ -0.33
COL5A1-203ENST00000460264 NXPH4O95158 308 aa12.98□□□□□ -0.33
COL5A1-203ENST00000460264 GCGP01275 180 aa12.98□□□□□ -0.33
COL5A1-203ENST00000460264 FBLL1A6NHQ2 334 aaKnown RBP12.97□□□□□ -0.33
COL5A1-203ENST00000460264 TAAR5O14804 337 aa12.97□□□□□ -0.33
COL5A1-203ENST00000460264 ZFP69Q49AA0 526 aa12.97□□□□□ -0.33
COL5A1-203ENST00000460264 AKR1C8PQ5T2L2 129 aa12.97□□□□□ -0.33
COL5A1-203ENST00000460264 PRNTQ86SH4 94 aa12.97□□□□□ -0.33
COL5A1-203ENST00000460264 CYTL1Q9NRR1 136 aa12.97□□□□□ -0.33
COL5A1-203ENST00000460264 SMLR1H3BR10 107 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 K7EQD1 137 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 SIVA1O15304 175 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 PFN1P07737 140 aaKnown RBP12.96□□□□□ -0.33
COL5A1-203ENST00000460264 GYPEP15421 78 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 FGF8P55075 233 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-203ENST00000460264 SMUG1Q53HV7 270 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 LYPD5Q6UWN5 251 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 NEGR1Q7Z3B1 354 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 OR4C5Q8NGB2 326 aa12.96□□□□□ -0.33
COL5A1-203ENST00000460264 BTF3P20290 206 aaKnown RBP12.95□□□□□ -0.34
COL5A1-203ENST00000460264 UBE2G2P60604 165 aa12.95□□□□□ -0.34
COL5A1-203ENST00000460264 PCNPQ8WW12 178 aaKnown RBP12.95□□□□□ -0.34
COL5A1-203ENST00000460264 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
COL5A1-203ENST00000460264 IFNA7P01567 189 aa12.94□□□□□ -0.34
COL5A1-203ENST00000460264 ORM1P02763 201 aa12.94□□□□□ -0.34
COL5A1-203ENST00000460264 SRIP30626 198 aa12.94□□□□□ -0.34
COL5A1-203ENST00000460264 LINC00315P59091 139 aa12.94□□□□□ -0.34
COL5A1-203ENST00000460264 SAPCD1Q5SSQ6 148 aa12.94□□□□□ -0.34
COL5A1-203ENST00000460264 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 FAM74A7A6NL05 159 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 C9JCJ5 164 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 PEX7O00628 323 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
COL5A1-203ENST00000460264 C16orf90A8MZG2 172 aa12.92□□□□□ -0.34
COL5A1-203ENST00000460264 GATA1P15976 413 aaPredicted RBP12.92□□□□□ -0.34
COL5A1-203ENST00000460264 PPT1P50897 306 aa12.92□□□□□ -0.34
COL5A1-203ENST00000460264 ZNF345Q14585 488 aa12.92□□□□□ -0.34
COL5A1-203ENST00000460264 ZNF876PQ49A33 203 aa12.92□□□□□ -0.34
COL5A1-203ENST00000460264 Q86TA4 180 aa12.92□□□□□ -0.34
COL5A1-203ENST00000460264 NKX6-2Q9C056 277 aaPredicted RBP12.92□□□□□ -0.34
COL5A1-203ENST00000460264 LOC100131303A0A0U1RQF7 123 aa12.91□□□□□ -0.34
COL5A1-203ENST00000460264 KCNRGQ8N5I3 272 aa12.91□□□□□ -0.34
COL5A1-203ENST00000460264 TXNDC17Q9BRA2 123 aa12.91□□□□□ -0.34
COL5A1-203ENST00000460264 KRTAP17-1Q9BYP8 105 aa12.91□□□□□ -0.34
COL5A1-203ENST00000460264 RNASE3P12724 160 aaKnown RBP12.9□□□□□ -0.34
COL5A1-203ENST00000460264 FHITP49789 147 aa12.9□□□□□ -0.34
COL5A1-203ENST00000460264 CFAP126Q5VTH2 177 aa12.9□□□□□ -0.34
COL5A1-203ENST00000460264 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
COL5A1-203ENST00000460264 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
COL5A1-203ENST00000460264 HIST1H2BAQ96A08 127 aa12.9□□□□□ -0.34
COL5A1-203ENST00000460264 PCLOQ9Y6V0 5065 aa12.89□□□□□ -0.35
COL5A1-203ENST00000460264 RS1O15537 224 aa12.89□□□□□ -0.35
COL5A1-203ENST00000460264 ZNF506Q5JVG8 444 aa12.89□□□□□ -0.35
COL5A1-203ENST00000460264 WFDC10BQ8IUB3 73 aa12.89□□□□□ -0.35
COL5A1-203ENST00000460264 OR11H4Q8NGC9 324 aa12.89□□□□□ -0.35
COL5A1-203ENST00000460264 PTH2Q96A98 100 aa12.89□□□□□ -0.35
COL5A1-203ENST00000460264 IGKV3D-20A0A0C4DH25 116 aa12.88□□□□□ -0.35
COL5A1-203ENST00000460264 PGPEP1LA6NFU8 196 aa12.88□□□□□ -0.35
COL5A1-203ENST00000460264 SH2D6Q7Z4S9 175 aa12.88□□□□□ -0.35
COL5A1-203ENST00000460264 SPATA12Q7Z6I5 190 aa12.88□□□□□ -0.35
COL5A1-203ENST00000460264 HMSDA8MTL9 139 aa12.87□□□□□ -0.35
COL5A1-203ENST00000460264 FABP5P3A8MUU1 101 aa12.87□□□□□ -0.35
COL5A1-203ENST00000460264 CIDEAO60543 219 aa12.87□□□□□ -0.35
COL5A1-203ENST00000460264 SLC25A29Q8N8R3 303 aa12.87□□□□□ -0.35
COL5A1-203ENST00000460264 NHLRC2Q8NBF2 726 aa12.87□□□□□ -0.35
COL5A1-203ENST00000460264 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
COL5A1-203ENST00000460264 LY96Q9Y6Y9 160 aa12.87□□□□□ -0.35
COL5A1-203ENST00000460264 ZC2HC1AQ96GY0 325 aa12.86□□□□□ -0.35
COL5A1-203ENST00000460264 FMC1Q96HJ9 113 aa12.86□□□□□ -0.35
COL5A1-203ENST00000460264 TCEAL7Q9BRU2 100 aa12.86□□□□□ -0.35
COL5A1-203ENST00000460264 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms