RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 SLAQ13239 276 aa10.96□□□□□ -0.65
HDLBP-223ENST00000449864 ZNF345Q14585 488 aa10.96□□□□□ -0.65
HDLBP-223ENST00000449864 KCNRGQ8N5I3 272 aa10.96□□□□□ -0.65
HDLBP-223ENST00000449864 C8orf49Q96NF6 230 aa10.96□□□□□ -0.65
HDLBP-223ENST00000449864 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.65
HDLBP-223ENST00000449864 CYTL1Q9NRR1 136 aa10.96□□□□□ -0.65
HDLBP-223ENST00000449864 A0A096LPF7 62 aa10.95□□□□□ -0.66
HDLBP-223ENST00000449864 IGHV3-16A0A0C4DH30 117 aa10.95□□□□□ -0.66
HDLBP-223ENST00000449864 PPT1P50897 306 aa10.95□□□□□ -0.66
HDLBP-223ENST00000449864 ESRGQ1W209 222 aa10.95□□□□□ -0.66
HDLBP-223ENST00000449864 SMUG1Q53HV7 270 aa10.95□□□□□ -0.66
HDLBP-223ENST00000449864 HHLA3Q9XRX5 114 aa10.95□□□□□ -0.66
HDLBP-223ENST00000449864 MRPS16Q9Y3D3 137 aaKnown RBP10.95□□□□□ -0.66
HDLBP-223ENST00000449864 HECTD4Q9Y4D8 3996 aa10.95□□□□□ -0.66
HDLBP-223ENST00000449864 KANTRA0A1W2PQU2 76 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 M0R2P5 195 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 PEX7O00628 323 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 IGLV2-11P01706 119 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 SFTA3P0C7M3 94 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 CRYBA4P53673 196 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 SAPCD1Q5SSQ6 148 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 STOML3Q8TAV4 291 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 RASL10AQ92737 203 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 NKX6-2Q9C056 277 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-223ENST00000449864 Q9H8V8 135 aa10.94□□□□□ -0.66
HDLBP-223ENST00000449864 FAM74A7A6NL05 159 aa10.93□□□□□ -0.66
HDLBP-223ENST00000449864 HMSDA8MTL9 139 aa10.93□□□□□ -0.66
HDLBP-223ENST00000449864 PFN1P07737 140 aaKnown RBP10.93□□□□□ -0.66
HDLBP-223ENST00000449864 ZNF80P51504 273 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-223ENST00000449864 FHL2Q14192 279 aa10.93□□□□□ -0.66
HDLBP-223ENST00000449864 C6orf223Q8N319 242 aa10.93□□□□□ -0.66
HDLBP-223ENST00000449864 PCNPQ8WW12 178 aaKnown RBP10.93□□□□□ -0.66
HDLBP-223ENST00000449864 ZNF479Q96JC4 524 aa10.93□□□□□ -0.66
HDLBP-223ENST00000449864 UPK3BQ9BT76 320 aa10.93□□□□□ -0.66
HDLBP-223ENST00000449864 ZNF471Q9BX82 626 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-223ENST00000449864 TRAV4A0A0B4J268 109 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 TRAV34A0A0B4J273 112 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 A0A0D9SG52 128 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 A0A1B0GVY2 172 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 BCL2L11O43521 198 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 Q86TA4 180 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 OR11H4Q8NGC9 324 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 LINC00479Q96M42 142 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 ARL2-SNX15V9GYD0 113 aa10.92□□□□□ -0.66
HDLBP-223ENST00000449864 PFDN1O60925 122 aa10.91□□□□□ -0.66
HDLBP-223ENST00000449864 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
HDLBP-223ENST00000449864 HIST1H2BAQ96A08 127 aa10.91□□□□□ -0.66
HDLBP-223ENST00000449864 C11orf21Q9P2W6 132 aa10.91□□□□□ -0.66
HDLBP-223ENST00000449864 UMAD1C9J7I0 102 aa10.9□□□□□ -0.66
HDLBP-223ENST00000449864 C9JCJ5 164 aa10.9□□□□□ -0.66
HDLBP-223ENST00000449864 SEC11BP0C7V7 166 aa10.9□□□□□ -0.66
HDLBP-223ENST00000449864 FHITP49789 147 aa10.9□□□□□ -0.66
HDLBP-223ENST00000449864 EIF5AP63241 154 aaKnown RBP10.9□□□□□ -0.66
HDLBP-223ENST00000449864 CST9LP1Q5W188 147 aa10.9□□□□□ -0.66
HDLBP-223ENST00000449864 FAM213BQ8TBF2 198 aa10.9□□□□□ -0.66
HDLBP-223ENST00000449864 ORM1P02763 201 aa10.89□□□□□ -0.67
HDLBP-223ENST00000449864 GYPEP15421 78 aa10.89□□□□□ -0.67
HDLBP-223ENST00000449864 SRIP30626 198 aa10.89□□□□□ -0.67
HDLBP-223ENST00000449864 UBE2G1P62253 170 aa10.89□□□□□ -0.67
HDLBP-223ENST00000449864 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
HDLBP-223ENST00000449864 NEGR1Q7Z3B1 354 aa10.89□□□□□ -0.67
HDLBP-223ENST00000449864 A0A1B0GV50 99 aa10.88□□□□□ -0.67
HDLBP-223ENST00000449864 NXPH4O95158 308 aa10.88□□□□□ -0.67
HDLBP-223ENST00000449864 SFT2D1Q8WV19 159 aa10.88□□□□□ -0.67
HDLBP-223ENST00000449864 FMC1Q96HJ9 113 aa10.88□□□□□ -0.67
HDLBP-223ENST00000449864 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
HDLBP-223ENST00000449864 A0A1W2PPQ1 181 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 FABP5P3A8MUU1 101 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 K7EQD1 137 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 SIVA1O15304 175 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 S100A4P26447 101 aaKnown RBP10.87□□□□□ -0.67
HDLBP-223ENST00000449864 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 KRTAP1-5Q9BYS1 174 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 DNAH2Q9P225 4427 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 DNAH17Q9UFH2 4485 aa10.87□□□□□ -0.67
HDLBP-223ENST00000449864 PAGE4O60829 102 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 TPT1P13693 172 aaKnown RBP10.86□□□□□ -0.67
HDLBP-223ENST00000449864 AKR1C3P42330 323 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 TNP2Q05952 138 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 LYPD5Q6UWN5 251 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 DPPA3Q6W0C5 159 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 TMUB2Q71RG4 321 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 TXNDC17Q9BRA2 123 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
HDLBP-223ENST00000449864 B4DEV8 164 aa10.85□□□□□ -0.67
HDLBP-223ENST00000449864 ASIPP42127 132 aa10.85□□□□□ -0.67
HDLBP-223ENST00000449864 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
HDLBP-223ENST00000449864 NHLRC2Q8NBF2 726 aa10.85□□□□□ -0.67
HDLBP-223ENST00000449864 MBD3L1Q8WWY6 194 aa10.85□□□□□ -0.67
HDLBP-223ENST00000449864 ZC2HC1AQ96GY0 325 aa10.85□□□□□ -0.67
HDLBP-223ENST00000449864 IGKV3D-20A0A0C4DH25 116 aa10.84□□□□□ -0.67
HDLBP-223ENST00000449864 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
HDLBP-223ENST00000449864 RS1O15537 224 aa10.84□□□□□ -0.67
HDLBP-223ENST00000449864 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
HDLBP-223ENST00000449864 RNASE3P12724 160 aaKnown RBP10.84□□□□□ -0.67
HDLBP-223ENST00000449864 FAM162BQ5T6X4 162 aa10.84□□□□□ -0.67
HDLBP-223ENST00000449864 CFAP126Q5VTH2 177 aa10.84□□□□□ -0.67
HDLBP-223ENST00000449864 FAT2Q9NYQ8 4349 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms