RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	MRAP2	Q96G30	205 aa		12.83	□□□□□ -0.36
TOM1-210	ENST00000449058	CELSR1	Q9NYQ6	3014 aa		12.82	□□□□□ -0.36
TOM1-210	ENST00000449058		A1L4Q6	167 aa		12.82	□□□□□ -0.36
TOM1-210	ENST00000449058	TCTA	P57738	103 aa		12.82	□□□□□ -0.36
TOM1-210	ENST00000449058	PCP2	Q8IVA1	136 aa		12.82	□□□□□ -0.36
TOM1-210	ENST00000449058	PRSS1	P07477	247 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	SMIM17	P0DL12	118 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	CFHR3	Q02985	330 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	LAGE3	Q14657	143 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	ADAMTSL5	Q6ZMM2	481 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	APRG1	Q8IVJ8	170 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058		A0A0G2JLM5	398 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058		K7EP13	123 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	ATP5L	O75964	103 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	DEFB1	P60022	68 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	SMPX	Q9UHP9	88 aa		12.81	□□□□□ -0.36
TOM1-210	ENST00000449058	SPTAN1	Q13813	2472 aa	Known RBP	12.81	□□□□□ -0.36
TOM1-210	ENST00000449058		J3KRW8	73 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	NMU	P48645	174 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	HSD52	Q0P140	79 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	OR4C5	Q8NGB2	326 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	PKD1L2	Q7Z442	2459 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	TRBV7-9	A0A0J9YWB2	115 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	C7orf71	A4D174	169 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	LCNL1	Q6ZST4	164 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	FOXC2	Q99958	501 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	RHPN1-AS1	Q9BWJ2	59 aa		12.8	□□□□□ -0.36
TOM1-210	ENST00000449058	AVP	P01185	164 aa		12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	IGKC	P01834	107 aa		12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	TMEM8B	A6NDV4	472 aa		12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	MED14OS	P0DP75	135 aa		12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	RPL11	P62913	178 aa	Known RBP	12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	TM4SF20	Q53R12	229 aa		12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	AMMECR1L	Q6DCA0	310 aa		12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	DAZ1	Q9NQZ3	744 aa	Known RBP	12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	PEF1	Q9UBV8	284 aa	Known RBP	12.79	□□□□□ -0.36
TOM1-210	ENST00000449058	IGKV2D-26	A0A0A0MRZ7	120 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	CIDEA	O60543	219 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	ASIP	P42127	132 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	KIR3DS1	Q14943	382 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	ANXA2R	Q3ZCQ2	193 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	ZNF580	Q9UK33	172 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	VPS13C	Q709C8	3753 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	TRAV8-6	A0A0B4J262	113 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058		B4DSR2	109 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058		F6UB75	175 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	DPM2	O94777	84 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058	SMIM2	Q9BVW6	85 aa		12.78	□□□□□ -0.36
TOM1-210	ENST00000449058		M0R381	172 aa		12.77	□□□□□ -0.36
TOM1-210	ENST00000449058	MYOZ3	Q8TDC0	251 aa		12.77	□□□□□ -0.36
TOM1-210	ENST00000449058	CFAP46	Q8IYW2	2715 aa		12.77	□□□□□ -0.37
TOM1-210	ENST00000449058		A6NDN8	102 aa		12.77	□□□□□ -0.37
TOM1-210	ENST00000449058		K7EMT4	169 aa		12.77	□□□□□ -0.37
TOM1-210	ENST00000449058	RNASE4	P34096	147 aa	Known RBP	12.77	□□□□□ -0.37
TOM1-210	ENST00000449058	S100A4	P26447	101 aa	Known RBP	12.76	□□□□□ -0.37
TOM1-210	ENST00000449058	RNASE8	Q8TDE3	154 aa	Known RBP	12.76	□□□□□ -0.37
TOM1-210	ENST00000449058	DPH3P1	Q9H4G8	78 aa		12.76	□□□□□ -0.37
TOM1-210	ENST00000449058		H3BRM9	83 aa		12.76	□□□□□ -0.37
TOM1-210	ENST00000449058	SPRY2	O43597	315 aa		12.76	□□□□□ -0.37
TOM1-210	ENST00000449058	RASL10A	Q92737	203 aa		12.76	□□□□□ -0.37
TOM1-210	ENST00000449058	PHLDA3	Q9Y5J5	127 aa		12.76	□□□□□ -0.37
TOM1-210	ENST00000449058	IGKV3-7	A0A075B6H7	116 aa		12.75	□□□□□ -0.37
TOM1-210	ENST00000449058	C20orf78	Q9BR46	151 aa		12.75	□□□□□ -0.37
TOM1-210	ENST00000449058	HIGD1B	Q9P298	99 aa		12.75	□□□□□ -0.37
TOM1-210	ENST00000449058	RNASE3	P12724	160 aa	Known RBP	12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	GATA3	P23771	443 aa		12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	MRPL35	Q9NZE8	188 aa	Known RBP	12.74	□□□□□ -0.37
TOM1-210	ENST00000449058		A0A087WX48	190 aa		12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	GNRH2	O43555	120 aa		12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	HLA-DRB4	P13762	266 aa		12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	SUMO2	P61956	95 aa	Known RBP	12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	C14orf178	Q8N769	122 aa	Predicted RBP	12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	HLA-DRB4	X5D2U9	266 aa		12.74	□□□□□ -0.37
TOM1-210	ENST00000449058	EDN2	P20800	178 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	ZC2HC1B	Q5TFG8	222 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	GTSCR1	Q86UQ5	136 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	DOPEY1	Q5JWR5	2465 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	C9orf118	A6NHY6	69 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	KLLN	B2CW77	178 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	RNF223	E7ERA6	249 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	NXPH4	O95158	308 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	PSMB8	P28062	276 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	DSCR9	P59020	149 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	TMEM95	Q3KNT9	176 aa		12.73	□□□□□ -0.37
TOM1-210	ENST00000449058	COL12A1	Q99715	3063 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058		K7EMI3	77 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	RBX1	P62877	108 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	ORMDL2	Q53FV1	153 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	POM121L12	Q8N7R1	296 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	DCANP1	Q8TF63	244 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	TTTY13	Q9BZ97	58 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	TMEM160	Q9NX00	188 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	SELENOK	Q9Y6D0	94 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	SLC25A16	P16260	332 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	SRD5A1	P18405	259 aa		12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	RPL39L	Q96EH5	51 aa	Known RBP	12.72	□□□□□ -0.37
TOM1-210	ENST00000449058	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.72	□□□□□ -0.37	9e-7	■■■□□ 16.8
TOM1-210	ENST00000449058	TRAV12-1	A0A0B4J245	112 aa		12.71	□□□□□ -0.37
TOM1-210	ENST00000449058	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.71	□□□□□ -0.37

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