RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 Q6ZTC4 211 aa10.08□□□□□ -0.8
SSBP3-208ENST00000444533 ZNF767PQ75MW2 155 aa10.08□□□□□ -0.8
SSBP3-208ENST00000444533 BIN3Q9NQY0 253 aa10.08□□□□□ -0.8
SSBP3-208ENST00000444533 TRGV2A0A075B6R0 118 aa10.07□□□□□ -0.8
SSBP3-208ENST00000444533 ORM1P02763 201 aa10.07□□□□□ -0.8
SSBP3-208ENST00000444533 HTN3P15516 51 aa10.07□□□□□ -0.8
SSBP3-208ENST00000444533 S100A4P26447 101 aaKnown RBP10.07□□□□□ -0.8
SSBP3-208ENST00000444533 SMIM12Q96EX1 92 aa10.07□□□□□ -0.8
SSBP3-208ENST00000444533 SPXQ9BT56 116 aa10.07□□□□□ -0.8
SSBP3-208ENST00000444533 TRGV1A0A0A0MS02 117 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 PLAC8L1A1L4L8 177 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 GAGE7O76087 117 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 ATP5G1P05496 136 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 TOR2AQ5JU69 321 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 ZNF506Q5JVG8 444 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 Q6ZQT7 251 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 COX8CQ7Z4L0 72 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
SSBP3-208ENST00000444533 ZC2HC1AQ96GY0 325 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 FAM210AQ96ND0 272 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 TP53TG3Q9ULZ0 132 aa10.06□□□□□ -0.8
SSBP3-208ENST00000444533 B4DEV8 164 aa10.05□□□□□ -0.8
SSBP3-208ENST00000444533 MGST1P10620 155 aaKnown RBP10.05□□□□□ -0.8
SSBP3-208ENST00000444533 ZNF80P51504 273 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-208ENST00000444533 CEBPGP53567 150 aa10.05□□□□□ -0.8
SSBP3-208ENST00000444533 TCTAP57738 103 aa10.05□□□□□ -0.8
SSBP3-208ENST00000444533 OR5I1Q13606 314 aa10.05□□□□□ -0.8
SSBP3-208ENST00000444533 CENPWQ5EE01 88 aa10.05□□□□□ -0.8
SSBP3-208ENST00000444533 NHLRC2Q8NBF2 726 aa10.05□□□□□ -0.8
SSBP3-208ENST00000444533 C11orf72Q8NBR9 251 aa10.05□□□□□ -0.8
SSBP3-208ENST00000444533 IGLL5B9A064 214 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 GNRH2O43555 120 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 SH2D1AO60880 128 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
SSBP3-208ENST00000444533 TYMSP04818 313 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 ASIPP42127 132 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 PEA15Q15121 130 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 ZNF674Q2M3X9 581 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 PRR27Q6MZM9 219 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 FAM210BQ96KR6 192 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 DERL1Q9BUN8 251 aa10.04□□□□□ -0.8
SSBP3-208ENST00000444533 IGHV3-16A0A0C4DH30 117 aa10.03□□□□□ -0.8
SSBP3-208ENST00000444533 F5H768 121 aa10.03□□□□□ -0.8
SSBP3-208ENST00000444533 M0R036 132 aa10.03□□□□□ -0.8
SSBP3-208ENST00000444533 M0R2P5 195 aa10.03□□□□□ -0.8
SSBP3-208ENST00000444533 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
SSBP3-208ENST00000444533 SPINK4O60575 86 aa10.02□□□□□ -0.81
SSBP3-208ENST00000444533 Q6ZTI0 123 aa10.02□□□□□ -0.81
SSBP3-208ENST00000444533 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.81
SSBP3-208ENST00000444533 NDUFAF3Q9BU61 184 aa10.02□□□□□ -0.81
SSBP3-208ENST00000444533 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
SSBP3-208ENST00000444533 XKRY2A2RUG3 117 aa10.01□□□□□ -0.81
SSBP3-208ENST00000444533 RAB19A4D1S5 217 aa10.01□□□□□ -0.81
SSBP3-208ENST00000444533 PARLQ9H300 379 aa10.01□□□□□ -0.81
SSBP3-208ENST00000444533 SMDT1Q9H4I9 107 aa10.01□□□□□ -0.81
SSBP3-208ENST00000444533 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
SSBP3-208ENST00000444533 KRBOX1C9JBD0 128 aa10□□□□□ -0.81
SSBP3-208ENST00000444533 C9JCJ5 164 aa10□□□□□ -0.81
SSBP3-208ENST00000444533 CRIP1P50238 77 aa10□□□□□ -0.81
SSBP3-208ENST00000444533 LINC01559Q495D7 138 aa10□□□□□ -0.81
SSBP3-208ENST00000444533 LINC00612Q8N6U2 182 aa10□□□□□ -0.81
SSBP3-208ENST00000444533 SYT8Q8NBV8 401 aa10□□□□□ -0.81
SSBP3-208ENST00000444533 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
SSBP3-208ENST00000444533 IGHV4-4A0A075B6R2 117 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 TMSB15BA0A087X1C1 80 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 IGKV3D-20A0A0C4DH25 116 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 P01737 135 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 RPS20P60866 119 aaKnown RBP9.99□□□□□ -0.81
SSBP3-208ENST00000444533 SLAQ13239 276 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 ZNF876PQ49A33 203 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 RASL10AQ92737 203 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 SMIM7Q9BQ49 75 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 IL36BQ9NZH7 164 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 PHLDA3Q9Y5J5 127 aa9.99□□□□□ -0.81
SSBP3-208ENST00000444533 ZNF727A8MUV8 499 aa9.98□□□□□ -0.81
SSBP3-208ENST00000444533 FAM74A3Q4VXF1 159 aa9.98□□□□□ -0.81
SSBP3-208ENST00000444533 C15orf53Q8NAA6 179 aa9.98□□□□□ -0.81
SSBP3-208ENST00000444533 OR4C5Q8NGB2 326 aa9.98□□□□□ -0.81
SSBP3-208ENST00000444533 TRGV4A0A0C4DH28 118 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 GRIFINA4D1Z8 144 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 H3BVH4 76 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 CIDEAO60543 219 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 CXCL1P09341 107 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 DNLZQ5SXM8 178 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 C9orf85Q96MD7 179 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
SSBP3-208ENST00000444533 TRAV4A0A0B4J268 109 aa9.96□□□□□ -0.82
SSBP3-208ENST00000444533 IGHV3-53P01767 116 aa9.96□□□□□ -0.82
SSBP3-208ENST00000444533 SRP19P09132 144 aaKnown RBP9.96□□□□□ -0.82
SSBP3-208ENST00000444533 ARMS2P0C7Q2 107 aa9.96□□□□□ -0.82
SSBP3-208ENST00000444533 RNASE3P12724 160 aaKnown RBP9.96□□□□□ -0.82
SSBP3-208ENST00000444533 CLLU1Q5K131 121 aa9.96□□□□□ -0.82
SSBP3-208ENST00000444533 TMEM88Q6PEY1 159 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms