RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ZNF345Q14585 488 aa14.6□□□□□ -0.07
CDKN3-204ENST00000442975 KCNRGQ8N5I3 272 aa14.6□□□□□ -0.07
CDKN3-204ENST00000442975 A0A096LPF7 62 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 TRGV4A0A0C4DH28 118 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 IGLV2-11P01706 119 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 SFTA3P0C7M3 94 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 ZNF80P51504 273 aaPredicted RBP14.59□□□□□ -0.07
CDKN3-204ENST00000442975 ESRGQ1W209 222 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 OR11H4Q8NGC9 324 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 KCNS1Q96KK3 526 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 PRO0255Q9UI72 69 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 ICOSQ9Y6W8 199 aa14.59□□□□□ -0.07
CDKN3-204ENST00000442975 NACAE9PAV3 2078 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 TRAV34A0A0B4J273 112 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 PEX7O00628 323 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 PPT1P50897 306 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 SMUG1Q53HV7 270 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 ZNF479Q96JC4 524 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 LINC00479Q96M42 142 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 ZNF471Q9BX82 626 aaPredicted RBP14.58□□□□□ -0.08
CDKN3-204ENST00000442975 HHLA3Q9XRX5 114 aa14.58□□□□□ -0.08
CDKN3-204ENST00000442975 KANTRA0A1W2PQU2 76 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 FAM74A7A6NL05 159 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 M0R2P5 195 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 FHITP49789 147 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 FHL2Q14192 279 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 STOML3Q8TAV4 291 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 RASL10AQ92737 203 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 Q9H8V8 135 aa14.57□□□□□ -0.08
CDKN3-204ENST00000442975 MRPS16Q9Y3D3 137 aaKnown RBP14.57□□□□□ -0.08
CDKN3-204ENST00000442975 FBLL1A6NHQ2 334 aaKnown RBP14.56□□□□□ -0.08
CDKN3-204ENST00000442975 BCL2L11O43521 198 aa14.56□□□□□ -0.08
CDKN3-204ENST00000442975 PFN1P07737 140 aaKnown RBP14.56□□□□□ -0.08
CDKN3-204ENST00000442975 CRYBA4P53673 196 aa14.56□□□□□ -0.08
CDKN3-204ENST00000442975 SLAQ13239 276 aa14.56□□□□□ -0.08
CDKN3-204ENST00000442975 C11orf21Q9P2W6 132 aa14.56□□□□□ -0.08
CDKN3-204ENST00000442975 DNAH11Q96DT5 4516 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 PKHD1P08F94 4074 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 A0A1B0GVY2 172 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 HMSDA8MTL9 139 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 SAPCD1Q5SSQ6 148 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 Q86TA4 180 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 OR4C5Q8NGB2 326 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 FAM213BQ8TBF2 198 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 UPK3BQ9BT76 320 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 ARL2-SNX15V9GYD0 113 aa14.55□□□□□ -0.08
CDKN3-204ENST00000442975 TRAV4A0A0B4J268 109 aa14.54□□□□□ -0.08
CDKN3-204ENST00000442975 A0A0D9SG52 128 aa14.54□□□□□ -0.08
CDKN3-204ENST00000442975 A0A1B0GV50 99 aa14.54□□□□□ -0.08
CDKN3-204ENST00000442975 C9JCJ5 164 aa14.54□□□□□ -0.08
CDKN3-204ENST00000442975 PFDN1O60925 122 aa14.54□□□□□ -0.08
CDKN3-204ENST00000442975 TTC32Q5I0X7 151 aa14.54□□□□□ -0.08
CDKN3-204ENST00000442975 C6orf223Q8N319 242 aa14.54□□□□□ -0.08
CDKN3-204ENST00000442975 PCNPQ8WW12 178 aaKnown RBP14.54□□□□□ -0.08
CDKN3-204ENST00000442975 NKX6-2Q9C056 277 aaPredicted RBP14.54□□□□□ -0.08
CDKN3-204ENST00000442975 CST9LP1Q5W188 147 aa14.53□□□□□ -0.08
CDKN3-204ENST00000442975 HIST1H2BAQ96A08 127 aa14.53□□□□□ -0.08
CDKN3-204ENST00000442975 DYNC1H1Q14204 4646 aaKnown RBP14.53□□□□□ -0.08
CDKN3-204ENST00000442975 MUC4Q99102 2169 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 SEC11BP0C7V7 166 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 GYPEP15421 78 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 SRIP30626 198 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 MRPL23Q16540 153 aaKnown RBP14.51□□□□□ -0.09
CDKN3-204ENST00000442975 ZNF876PQ49A33 203 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 SFT2D1Q8WV19 159 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 KRTAP1-5Q9BYS1 174 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 PKD1P98161 4303 aa14.51□□□□□ -0.09
CDKN3-204ENST00000442975 HERC2O95714 4834 aa14.5□□□□□ -0.09
CDKN3-204ENST00000442975 UMAD1C9J7I0 102 aa14.5□□□□□ -0.09
CDKN3-204ENST00000442975 NXPH4O95158 308 aa14.5□□□□□ -0.09
CDKN3-204ENST00000442975 UBE2G1P62253 170 aa14.5□□□□□ -0.09
CDKN3-204ENST00000442975 K7EQD1 137 aa14.49□□□□□ -0.09
CDKN3-204ENST00000442975 EIF5AP63241 154 aaKnown RBP14.49□□□□□ -0.09
CDKN3-204ENST00000442975 TMUB2Q71RG4 321 aa14.49□□□□□ -0.09
CDKN3-204ENST00000442975 PAGE4O60829 102 aa14.48□□□□□ -0.09
CDKN3-204ENST00000442975 S100A4P26447 101 aaKnown RBP14.48□□□□□ -0.09
CDKN3-204ENST00000442975 NEGR1Q7Z3B1 354 aa14.48□□□□□ -0.09
CDKN3-204ENST00000442975 FMC1Q96HJ9 113 aa14.48□□□□□ -0.09
CDKN3-204ENST00000442975 C9orf85Q96MD7 179 aa14.48□□□□□ -0.09
CDKN3-204ENST00000442975 TCEAL7Q9BRU2 100 aa14.48□□□□□ -0.09
CDKN3-204ENST00000442975 KIAA1109Q2LD37 5005 aa14.47□□□□□ -0.09
CDKN3-204ENST00000442975 ORM1P02763 201 aa14.47□□□□□ -0.09
CDKN3-204ENST00000442975 TPT1P13693 172 aaKnown RBP14.47□□□□□ -0.09
CDKN3-204ENST00000442975 AKR1C3P42330 323 aa14.47□□□□□ -0.09
CDKN3-204ENST00000442975 TNP2Q05952 138 aa14.47□□□□□ -0.09
CDKN3-204ENST00000442975 ZC2HC1AQ96GY0 325 aa14.47□□□□□ -0.09
CDKN3-204ENST00000442975 IGKV3D-20A0A0C4DH25 116 aa14.46□□□□□ -0.09
CDKN3-204ENST00000442975 FABP5P3A8MUU1 101 aa14.46□□□□□ -0.09
CDKN3-204ENST00000442975 SIVA1O15304 175 aa14.46□□□□□ -0.09
CDKN3-204ENST00000442975 ASIPP42127 132 aa14.46□□□□□ -0.09
CDKN3-204ENST00000442975 ZNF506Q5JVG8 444 aa14.46□□□□□ -0.09
CDKN3-204ENST00000442975 DPPA3Q6W0C5 159 aa14.46□□□□□ -0.09
CDKN3-204ENST00000442975 NHLRC2Q8NBF2 726 aa14.46□□□□□ -0.09
CDKN3-204ENST00000442975 IGHV3-73A0A0B4J1V6 119 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 LOC100131303A0A0U1RQF7 123 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 A0A1W2PPQ1 181 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 B4DEV8 164 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 M0R036 132 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 RNASE3P12724 160 aaKnown RBP14.45□□□□□ -0.1
CDKN3-204ENST00000442975 CFAP126Q5VTH2 177 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms