RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 TANC1Q9C0D5 1861 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 MAST2Q6P0Q8 1798 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGLV1-50A0A075B6I6 118 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGLV3-10A0A075B6K4 115 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 SOD1P00441 154 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 SRP19P09132 144 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 RNASE4P34096 147 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 UBE2BP63146 152 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 BSPH1Q075Z2 132 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 Q6ZQT7 251 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 ZNF286AQ9HBT8 521 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 V9GYH0 126 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 USP9XQ93008 2570 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 MED12LQ86YW9 2145 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 DSCAMO60469 2012 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 COL1A1P02452 1464 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 KDM3BQ7LBC6 1761 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 PLXNB1O43157 2135 aa2.72□□□□□ -1.97
CDC42BPA-207ENST00000441725 ACACBO00763 2458 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 hADV29S1A0JD25 119 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 PANO1I0J062 215 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGKV1-39P01597 117 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 HLA-DQA1P01909 254 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGKV1-16P04430 117 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGKV1D-39P04432 117 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 ZNF688P0C7X2 276 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGHV1-8P0DP01 117 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 FAUP35544 74 aaKnown RBP2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 FUT5Q11128 374 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 IGFBP7Q16270 282 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 NMSQ5H8A3 153 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 PDPNQ86YL7 162 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 CLDND2Q8NHS1 167 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 PPDPFLQ8WWR9 84 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 COPS9Q8WXC6 57 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 ZNF414Q96IQ9 312 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 RPP21Q9H633 154 aaKnown RBP2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 PRO0461Q9UI25 63 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 CELA1Q9UNI1 258 aa2.71□□□□□ -1.97
CDC42BPA-207ENST00000441725 USP24Q9UPU5 2620 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 NCOR2Q9Y618 2525 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGHV1OR15-9A0A0B4J2B8 117 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 TRBV7-7A0A0K0K1E9 115 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 C9JCJ5 164 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 SYS1-DBNDD2H3BUS1 97 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 NUPR1O60356 82 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF737O75373 536 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 HBDP02042 147 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 CD7P09564 240 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 ELK1P19419 428 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 NUMA1Q14980 2115 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 SBSPONQ8IVN8 264 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 OR10G2Q8NGC3 310 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 C18orf32Q8TCD1 76 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 ITLN2Q8WWU7 325 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 IL36BQ9NZH7 164 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 KIF25-AS1Q9Y6Z4 181 aa2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZFHX2Q9C0A1 2572 aaPredicted RBP2.71□□□□□ -1.98
CDC42BPA-207ENST00000441725 MAP1BP46821 2468 aaKnown RBP2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 TRBV24-1A0A075B6N3 115 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 NAP1L6A6NFF2 107 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 K7EM74 188 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 PRM2P04554 102 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 COL8A2P25067 703 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 CDK5R1Q15078 307 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 TMEM155Q4W5P6 130 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 FAM78AQ5JUQ0 283 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 GUSBP11Q6P575 273 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 C7orf65Q6ZTY9 151 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 SPATA12Q7Z6I5 190 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 HMGN2P46Q86SG4 172 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 FGF13Q92913 245 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 C8orf17Q9NRJ1 99 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 COL2A1P02458 1487 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 SVILO95425 2214 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 FAM208BQ5VWN6 2430 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGHV1-45A0A0A0MS14 117 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGKV1-6A0A0C4DH72 117 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 SDCBPO00560 298 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 LYRM1O43325 122 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF324O75467 553 aaPredicted RBP2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 IGKCP01834 107 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 CCL20P78556 96 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 OR8B3Q8NGG8 313 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 DIRC1Q969H9 104 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 NPCDR1Q9BY65 106 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 RABAC1Q9UI14 185 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 REV3LO60673 3130 aa2.7□□□□□ -1.98
CDC42BPA-207ENST00000441725 ARFGEF2Q9Y6D5 1785 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 ZNF646O15015 1829 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 OBSL1O75147 1896 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 PTPRDP23468 1912 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 SSSCA1O60232 199 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 APCSP02743 223 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 CMC4P56277 68 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 LSM3P62310 102 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 RPL30P62888 115 aaKnown RBP2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 BPTFQ12830 3046 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 INSL4Q14641 139 aa2.69□□□□□ -1.98
CDC42BPA-207ENST00000441725 KISS1Q15726 138 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms