RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 OR5F1O95221 314 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 COX6A1P12074 109 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 ALX1Q15699 326 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 RGS21Q2M5E4 152 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 C12orf74Q32Q52 190 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 Q5VSD8 79 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 SBSPONQ8IVN8 264 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 KRT222Q8N1A0 295 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 HIST3H2BBQ8N257 126 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 OR4E2Q8NGC2 313 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 AQP3Q92482 292 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 CMSS1Q9BQ75 279 aaKnown RBP0.98□□□□□ -2.25
VPS41-207ENST00000439468 UQCC1Q9NVA1 299 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 IDI2-AS1Q9NZ38 188 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 GLTPQ9NZD2 209 aa0.98□□□□□ -2.25
VPS41-207ENST00000439468 SOX21Q9Y651 276 aaPredicted RBP0.98□□□□□ -2.25
VPS41-207ENST00000439468 USH2AO75445 5202 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 hCG_1818297A0A087WSY0 165 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 A8MT66 165 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 C1orf196B1AJZ1 125 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 ZNF682O95780 498 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 IFNA10P01566 189 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 SMIM17P0DL12 118 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 CAPZBP47756 277 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 LINC01554Q52M75 96 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 RNASE10Q5GAN6 216 aaKnown RBP0.97□□□□□ -2.25
VPS41-207ENST00000439468 DPPA3Q6W0C5 159 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 GDPD1Q8N9F7 314 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 ISOC1Q96CN7 298 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 PRAP1Q96NZ9 151 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 SERPINI1Q99574 410 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 CCDC90BQ9GZT6 254 aa0.97□□□□□ -2.25
VPS41-207ENST00000439468 C2orf70A6NJV1 201 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 E2F6O75461 281 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 RBP1P09455 135 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 MGST1P10620 155 aaKnown RBP0.96□□□□□ -2.26
VPS41-207ENST00000439468 SRIP30626 198 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 SSR2P43308 183 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 SERPINB9P50453 376 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 EDDM3AQ14507 147 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 RHEBQ15382 184 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 S100A7AQ86SG5 101 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 C12orf45Q8N5I9 185 aaPredicted RBP0.96□□□□□ -2.26
VPS41-207ENST00000439468 WFDC9Q8NEX5 89 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 OR51A2Q8NGJ7 313 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 SLC25A40Q8TBP6 338 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 ITFG2Q969R8 447 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 BPESC1Q9GZL8 116 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 OSTCQ9NRP0 149 aa0.96□□□□□ -2.26
VPS41-207ENST00000439468 A0A0G2JMM0 328 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 A0A1W2PPB8 328 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 A0A1W2PRS3 328 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 KIR3DP1A8MWS1 328 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 OR2T1O43869 369 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 PDE6DO43924 150 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 AP3S2P59780 193 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 ERVS71-1P61550 626 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 CTAG1AP78358 180 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 IAH1Q2TAA2 248 aaPredicted RBP0.95□□□□□ -2.26
VPS41-207ENST00000439468 TMEM97Q5BJF2 176 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 C22orf39Q6P5X5 142 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.95□□□□□ -2.26
VPS41-207ENST00000439468 OR6V1Q8N148 313 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 LINC00471Q8N535 108 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 LINC00311Q8N616 119 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 OR52L1Q8NGH7 329 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 OR4D11Q8NGI4 311 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 BORCS7Q96B45 105 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 GPR146Q96CH1 333 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 DGCR14Q96DF8 476 aaKnown RBP0.95□□□□□ -2.26
VPS41-207ENST00000439468 C20orf27Q9GZN8 174 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 MED9Q9NWA0 146 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 OR5AC2Q9NZP5 309 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 SLC22A13Q9Y226 551 aa0.95□□□□□ -2.26
VPS41-207ENST00000439468 MUC12Q9UKN1 5478 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 DNAH8Q96JB1 4490 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 TANC2Q9HCD6 1990 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 A0A0D9SFI3 127 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 A0A0D9SG52 128 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 CLDN25C9JDP6 229 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 HAND1O96004 215 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 S100A4P26447 101 aaKnown RBP0.94□□□□□ -2.26
VPS41-207ENST00000439468 BRS3P32247 399 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 DCDP81605 110 aaKnown RBP0.94□□□□□ -2.26
VPS41-207ENST00000439468 ADAT3Q96EY9 351 aaPredicted RBP0.94□□□□□ -2.26
VPS41-207ENST00000439468 SIGMAR1Q99720 223 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 NABP2Q9BQ15 211 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 TLNRD1Q9H1K6 362 aa0.94□□□□□ -2.26
VPS41-207ENST00000439468 IGKV1-9A0A0C4DH69 117 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 FUOMA2VDF0 154 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 B4DSR2 109 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 E7EQ34 232 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 SERPINE1P05121 402 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 S100A6P06703 90 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 CTXN2P0C2S0 81 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 EFNA4P52798 201 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 DEFB110Q30KQ9 67 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 NCMAPQ5T1S8 102 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 TEX36Q5VZQ5 186 aa0.93□□□□□ -2.26
VPS41-207ENST00000439468 LCA10Q71F78 164 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms