RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SONP18583 2426 aaKnown RBP9.24□□□□□ -0.93
PTCH1-209ENST00000437951 LYRM9A8MSI8 78 aa9.24□□□□□ -0.93
PTCH1-209ENST00000437951 MSRB2Q9Y3D2 182 aa9.24□□□□□ -0.93
PTCH1-209ENST00000437951 C10orf55Q5SWW7 151 aa9.24□□□□□ -0.93
PTCH1-209ENST00000437951 C14orf132Q9NPU4 83 aa9.24□□□□□ -0.93
PTCH1-209ENST00000437951 DKK1O94907 266 aa9.24□□□□□ -0.93
PTCH1-209ENST00000437951 ZFP36L1Q07352 338 aaKnown RBP9.24□□□□□ -0.93
PTCH1-209ENST00000437951 PIFOQ8TCI5 191 aa9.24□□□□□ -0.93
PTCH1-209ENST00000437951 RNF152Q8N8N0 203 aa9.24□□□□□ -0.93
PTCH1-209ENST00000437951 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
PTCH1-209ENST00000437951 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 DAD1P61803 113 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 ZSWIM8A7E2V4 1837 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 ATP1A1-AS1Q5TC04 95 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 PSPNO60542 156 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 LY6DQ14210 128 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 GAFA1Q96PS6 74 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 KLHL30-AS1Q8NEE0 82 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 NDUFA4O00483 81 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 OBSL1O75147 1896 aa9.23□□□□□ -0.93
PTCH1-209ENST00000437951 C22orf46C9J442 243 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 VWC2Q2TAL6 325 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 C3orf22Q8N5N4 141 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 ZC2HC1AQ96GY0 325 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 E9PLN8 166 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 LGALS9O00182 355 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 GATA3P23771 443 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 THSD7AQ9UPZ6 1657 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 CD24P25063 80 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 Q9H8V8 135 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 IGLV3-19P01714 112 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 EFNA4P52798 201 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 APOC4P55056 127 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 ZNF833PQ6ZTB9 187 aa9.22□□□□□ -0.93
PTCH1-209ENST00000437951 TGFBR3LH3BV60 316 aa9.21□□□□□ -0.93
PTCH1-209ENST00000437951 CFHR1Q03591 330 aa9.21□□□□□ -0.93
PTCH1-209ENST00000437951 ANXA2RQ3ZCQ2 193 aa9.21□□□□□ -0.93
PTCH1-209ENST00000437951 IGKV3D-7A0A0C4DH55 119 aa9.21□□□□□ -0.93
PTCH1-209ENST00000437951 B4DSR2 109 aa9.21□□□□□ -0.93
PTCH1-209ENST00000437951 VOPP1Q96AW1 172 aa9.21□□□□□ -0.93
PTCH1-209ENST00000437951 C10orf105Q8TEF2 133 aa9.21□□□□□ -0.94
PTCH1-209ENST00000437951 ZNF726P1Q15940 193 aa9.21□□□□□ -0.94
PTCH1-209ENST00000437951 PCP2Q8IVA1 136 aa9.21□□□□□ -0.94
PTCH1-209ENST00000437951 SIP14410 1827 aa9.21□□□□□ -0.94
PTCH1-209ENST00000437951 SPTSSBQ8NFR3 76 aa9.21□□□□□ -0.94
PTCH1-209ENST00000437951 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 Q6ZRM9 215 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 FXYD5Q96DB9 178 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 A0A087WV48 116 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 CSPG4Q6UVK1 2322 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 A0A0G2JRQ6 117 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 ZNRF2Q8NHG8 242 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 PLXNA2O75051 1894 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 PRR31Q5SQ13 230 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 FOXL2NBQ6ZUU3 175 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 PTPN13Q12923 2485 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 NXPH4O95158 308 aa9.2□□□□□ -0.94
PTCH1-209ENST00000437951 ZNF672Q499Z4 452 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-209ENST00000437951 DENND4CQ5VZ89 1909 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 LMO1P25800 156 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 TMEM61Q8N0U2 210 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 PRB3Q04118 309 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-209ENST00000437951 FAM208BQ5VWN6 2430 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 ETDCA0A1B0GVM5 59 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 WFDC2Q14508 124 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
PTCH1-209ENST00000437951 COL11A2P13942 1736 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-209ENST00000437951 GGNQ86UU5 652 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 C5orf63A6NC05 138 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 DAZ2Q13117 558 aaKnown RBP9.18□□□□□ -0.94
PTCH1-209ENST00000437951 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
PTCH1-209ENST00000437951 IMUPQ9GZP8 106 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
PTCH1-209ENST00000437951 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 DEFB104AQ8WTQ1 72 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-209ENST00000437951 TRBV12-3P01733 135 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 UBE2E2Q96LR5 201 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.18□□□□□ -0.94
PTCH1-209ENST00000437951 KIAA1671Q9BY89 1806 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 RS1O15537 224 aa9.18□□□□□ -0.94
PTCH1-209ENST00000437951 AGRNO00468 2067 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 H3BUA1 57 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 CSRP1P21291 193 aaKnown RBP9.17□□□□□ -0.94
PTCH1-209ENST00000437951 LINC00311Q8N616 119 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 A4D1N5 150 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 LINC01619G3V211 115 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 MRPL36Q9P0J6 103 aaKnown RBP9.17□□□□□ -0.94
PTCH1-209ENST00000437951 PLXNA3P51805 1871 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 TMEM219Q86XT9 240 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 IGKV1D-17A0A075B6S4 117 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 SPRR3Q9UBC9 169 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 K7EN84 100 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 IGKV1-16P04430 117 aa9.17□□□□□ -0.94
PTCH1-209ENST00000437951 DEFB131AP59861 70 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 347.7 ms