RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 TSSC4Q9Y5U2 329 aaPredicted RBP3.27□□□□□ -1.89
HLA-N-201ENST00000437516 SETD2Q9BYW2 2564 aaPredicted RBP3.27□□□□□ -1.89
HLA-N-201ENST00000437516 DSCAMO60469 2012 aa3.27□□□□□ -1.89
HLA-N-201ENST00000437516 CFAP46Q8IYW2 2715 aa3.27□□□□□ -1.89
HLA-N-201ENST00000437516 WDFY4Q6ZS81 3184 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 DOCK7Q96N67 2140 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 HELZ2Q9BYK8 2649 aaKnown RBP3.26□□□□□ -1.89
HLA-N-201ENST00000437516 ASPMQ8IZT6 3477 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 RTTNQ86VV8 2226 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 IGHV3OR16-13A0A075B7E8 117 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 IGHV3-49A0A0A0MS15 119 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 IGHV3-74A0A0B4J1X5 117 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 TRAV41A0A0B4J266 112 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 PRSS29PA6NIE9 313 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 LINC01548A6NM66 108 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 RNF223E7ERA6 249 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 G3V318 75 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 H3BMG7 143 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 NDUFS8O00217 210 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 NDUFA4O00483 81 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 NPFFO15130 113 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 BRI3O95415 125 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 MGPP08493 103 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 SAA4P35542 130 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 ARL3P36405 182 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 UBE2D1P51668 147 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 HERVK_113P61574 105 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 TCF15Q12870 199 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 SCGB2A2Q13296 93 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 ANXA2RQ3ZCQ2 193 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 C19orf54Q5BKX5 351 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 LYRM7Q5U5X0 104 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 MORN3Q6PF18 240 aaPredicted RBP3.26□□□□□ -1.89
HLA-N-201ENST00000437516 SH2D6Q7Z4S9 175 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 DLX4Q92988 240 aaPredicted RBP3.26□□□□□ -1.89
HLA-N-201ENST00000437516 TMEM141Q96I45 108 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 C20orf173Q96LM9 149 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 SPOCK3Q9BQ16 436 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 PRADC1Q9BSG0 188 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 KLK15Q9H2R5 256 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 MOB4Q9Y3A3 225 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 TECTAO75443 2155 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 ARID1AO14497 2285 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 FBN2P35556 2912 aa3.26□□□□□ -1.89
HLA-N-201ENST00000437516 TEX15Q9BXT5 2789 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 NCOR2Q9Y618 2525 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 CELSR3Q9NYQ7 3312 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 DSCAML1Q8TD84 2053 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 IGHV4OR15-8A0A075B7B6 117 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 A0A087WW49 117 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 A0A1B0GV72 72 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 C11orf86A6NJI1 115 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 ZNF815PA8K554 130 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 H3BUA1 57 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 SOCS3O14543 225 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 GNRH2O43555 120 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 NXPH4O95158 308 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 CRYGDP07320 174 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
HLA-N-201ENST00000437516 COX6B1P14854 86 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 NBL1P41271 181 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 LMO4P61968 165 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
HLA-N-201ENST00000437516 PMVKQ15126 192 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 CFAP126Q5VTH2 177 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 AMTNQ6UX39 209 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 Q6ZQT7 251 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 LCNL1Q6ZST4 164 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 GPHB5Q86YW7 130 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 C14orf178Q8N769 122 aaPredicted RBP3.25□□□□□ -1.89
HLA-N-201ENST00000437516 PLEKHB2Q96CS7 222 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 RPL39LQ96EH5 51 aaKnown RBP3.25□□□□□ -1.89
HLA-N-201ENST00000437516 GTSF1LQ9H1H1 148 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 VCX2Q9H322 139 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 PGPEP1Q9NXJ5 209 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 PHLDA3Q9Y5J5 127 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 KIF25-AS1Q9Y6Z4 181 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 ZFYVE26Q68DK2 2539 aa3.25□□□□□ -1.89
HLA-N-201ENST00000437516 ZNF407Q9C0G0 2248 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 DNAH14Q0VDD8 3507 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 TRBV20-1A0A075B6N2 111 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 A0A0J9YY99 117 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 TRBV6-5A0A0K0K1A5 114 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 IGIPA6NJ69 53 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 J3KRW8 73 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 VCYO14598 125 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 DUSP14O95147 198 aaKnown RBP3.24□□□□□ -1.89
HLA-N-201ENST00000437516 APOMO95445 188 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 TSPAN13O95857 204 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 IGF1P05019 195 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 RNASE4P34096 147 aaKnown RBP3.24□□□□□ -1.89
HLA-N-201ENST00000437516 PSMB2P49721 201 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 SMCPP49901 116 aaPredicted RBP3.24□□□□□ -1.89
HLA-N-201ENST00000437516 POLR2KP53803 58 aaKnown RBP3.24□□□□□ -1.89
HLA-N-201ENST00000437516 LINC00315P59091 139 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 UBE2D3P61077 147 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 UBE2D2P62837 147 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 SMAGPQ0VAQ4 97 aa3.24□□□□□ -1.89
HLA-N-201ENST00000437516 KLRB1Q12918 225 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms