RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 FLI1Q01543 452 aaPredicted RBP12.16□□□□□ -0.46
NUP50-208ENST00000430547 EPDR1Q9UM22 224 aa12.16□□□□□ -0.46
NUP50-208ENST00000430547 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
NUP50-208ENST00000430547 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 A0A1W2PRE2 83 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 FBLL1A6NHQ2 334 aaKnown RBP12.15□□□□□ -0.46
NUP50-208ENST00000430547 M0R2P5 195 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 GNRH2O43555 120 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 TYMSP04818 313 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 SFTA3P0C7M3 94 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 FHL2Q14192 279 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
NUP50-208ENST00000430547 PRNTQ86SH4 94 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 TMEM75Q8N9X5 138 aa12.15□□□□□ -0.46
NUP50-208ENST00000430547 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
NUP50-208ENST00000430547 G3V3Q6 166 aa12.14□□□□□ -0.47
NUP50-208ENST00000430547 GCGP01275 180 aa12.14□□□□□ -0.47
NUP50-208ENST00000430547 IFNA7P01567 189 aa12.14□□□□□ -0.47
NUP50-208ENST00000430547 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
NUP50-208ENST00000430547 OR4C5Q8NGB2 326 aa12.14□□□□□ -0.47
NUP50-208ENST00000430547 ZNF479Q96JC4 524 aa12.14□□□□□ -0.47
NUP50-208ENST00000430547 TRAV4A0A0B4J268 109 aa12.13□□□□□ -0.47
NUP50-208ENST00000430547 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
NUP50-208ENST00000430547 PPT1P50897 306 aa12.13□□□□□ -0.47
NUP50-208ENST00000430547 UBE2G2P60604 165 aa12.13□□□□□ -0.47
NUP50-208ENST00000430547 ZNF726P1Q15940 193 aa12.13□□□□□ -0.47
NUP50-208ENST00000430547 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
NUP50-208ENST00000430547 PFN1P07737 140 aaKnown RBP12.12□□□□□ -0.47
NUP50-208ENST00000430547 SRIP30626 198 aa12.12□□□□□ -0.47
NUP50-208ENST00000430547 FGF8P55075 233 aaPredicted RBP12.12□□□□□ -0.47
NUP50-208ENST00000430547 NEGR1Q7Z3B1 354 aa12.12□□□□□ -0.47
NUP50-208ENST00000430547 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
NUP50-208ENST00000430547 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 SMLR1H3BR10 107 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 SIVA1O15304 175 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 ORM1P02763 201 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
NUP50-208ENST00000430547 TNP2Q05952 138 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 PKHD1P08F94 4074 aa12.11□□□□□ -0.47
NUP50-208ENST00000430547 C9JCJ5 164 aa12.1□□□□□ -0.47
NUP50-208ENST00000430547 NXPH4O95158 308 aa12.1□□□□□ -0.47
NUP50-208ENST00000430547 GYPEP15421 78 aa12.1□□□□□ -0.47
NUP50-208ENST00000430547 STOML3Q8TAV4 291 aa12.1□□□□□ -0.47
NUP50-208ENST00000430547 KRTAP1-5Q9BYS1 174 aa12.1□□□□□ -0.47
NUP50-208ENST00000430547 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
NUP50-208ENST00000430547 K7EQD1 137 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 PEX7O00628 323 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 ZNF345Q14585 488 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 ZNF876PQ49A33 203 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 HIST1H2BAQ96A08 127 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 TXNDC17Q9BRA2 123 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 PKD1P98161 4303 aa12.09□□□□□ -0.47
NUP50-208ENST00000430547 TRAV34A0A0B4J273 112 aa12.08□□□□□ -0.48
NUP50-208ENST00000430547 FAM74A7A6NL05 159 aa12.08□□□□□ -0.48
NUP50-208ENST00000430547 BTF3P20290 206 aaKnown RBP12.08□□□□□ -0.48
NUP50-208ENST00000430547 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
NUP50-208ENST00000430547 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
NUP50-208ENST00000430547 LINC00479Q96M42 142 aa12.08□□□□□ -0.48
NUP50-208ENST00000430547 C11orf21Q9P2W6 132 aa12.08□□□□□ -0.48
NUP50-208ENST00000430547 KANTRA0A1W2PQU2 76 aa12.07□□□□□ -0.48
NUP50-208ENST00000430547 A0A0D9SG52 128 aa12.06□□□□□ -0.48
NUP50-208ENST00000430547 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
NUP50-208ENST00000430547 UBE2G1P62253 170 aa12.06□□□□□ -0.48
NUP50-208ENST00000430547 Q86TA4 180 aa12.06□□□□□ -0.48
NUP50-208ENST00000430547 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
NUP50-208ENST00000430547 NHLRC2Q8NBF2 726 aa12.06□□□□□ -0.48
NUP50-208ENST00000430547 ZNF471Q9BX82 626 aaPredicted RBP12.06□□□□□ -0.48
NUP50-208ENST00000430547 HMSDA8MTL9 139 aa12.05□□□□□ -0.48
NUP50-208ENST00000430547 FABP5P3A8MUU1 101 aa12.05□□□□□ -0.48
NUP50-208ENST00000430547 CIDEAO60543 219 aa12.05□□□□□ -0.48
NUP50-208ENST00000430547 CST9LP1Q5W188 147 aa12.05□□□□□ -0.48
NUP50-208ENST00000430547 SH2D6Q7Z4S9 175 aa12.05□□□□□ -0.48
NUP50-208ENST00000430547 C9orf85Q96MD7 179 aa12.05□□□□□ -0.48
NUP50-208ENST00000430547 TRAV9-2A0A087WT02 112 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 C16orf90A8MZG2 172 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 UMAD1C9J7I0 102 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 SEC11BP0C7V7 166 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 GATA1P15976 413 aaPredicted RBP12.04□□□□□ -0.48
NUP50-208ENST00000430547 LINC00315P59091 139 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 FAM213BQ8TBF2 198 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 FMC1Q96HJ9 113 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 TCEAL7Q9BRU2 100 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 LY96Q9Y6Y9 160 aa12.04□□□□□ -0.48
NUP50-208ENST00000430547 HERC2O95714 4834 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 BCL2L11O43521 198 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 PFDN1O60925 122 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 ASIPP42127 132 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 FHITP49789 147 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
NUP50-208ENST00000430547 ZNF506Q5JVG8 444 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 OR11H4Q8NGC9 324 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 SFT2D1Q8WV19 159 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 ZFP30Q9Y2G7 519 aa12.03□□□□□ -0.48
NUP50-208ENST00000430547 KIAA1109Q2LD37 5005 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms