RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 TRAV12-2A0A075B6T6 113 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 ZNF736B4DX44 427 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 YPEL1O60688 119 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 HIST1H1DP16402 221 aaKnown RBP1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 FGF7P21781 194 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 MRPS10P82664 201 aaKnown RBP1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 SCIMPQ6UWF3 145 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 CASC2Q6XLA1 102 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 ATP11AUNQ6ZP68 121 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 Q6ZRN7 208 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 GKN2Q86XP6 184 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 SNX29P2Q8IUI4 249 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 ATP6V0E2Q8NHE4 81 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 SMIM7Q9BQ49 75 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 PSMG3Q9BT73 122 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 PDCD10Q9BUL8 212 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 UNC13CQ8NB66 2214 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 COL5A3P25940 1745 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 CASZ1Q86V15 1759 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 SIP14410 1827 aa1.29□□□□□ -2.2
HMGB1P9-201ENST00000429856 TRBV6-8A0A0A6YYG3 113 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 C20orf202A1L168 122 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 IFITM5A6NNB3 132 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 HYPMO75409 117 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 KRTAP13-4Q3LI77 160 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 TEX261Q6UWH6 196 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 C5orf17Q8NAS9 161 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 SNRNP25Q9BV90 132 aaKnown RBP1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 SEC11CQ9BY50 192 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 COA4Q9NYJ1 87 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 BOKQ9UMX3 212 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 NOP16Q9Y3C1 178 aaKnown RBP1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 NAIPQ13075 1403 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 VWDEQ8N2E2 1590 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 PTPRDP23468 1912 aa1.28□□□□□ -2.2
HMGB1P9-201ENST00000429856 CASP8AP2Q9UKL3 1982 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 CUL7Q14999 1698 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 J3QRE1 110 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 CCL16O15467 120 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 SNAPC5O75971 98 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 SMIM6P0DI80 62 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 RNASE3P12724 160 aaKnown RBP1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 RBP2P50120 134 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 BTG2P78543 158 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 LINC01545Q5VT33 79 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 SLC25A26Q70HW3 274 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 COA5Q86WW8 74 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 ZCCHC13Q8WW36 166 aaKnown RBP1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 PATE1Q8WXA2 126 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 LINC00052Q96N35 136 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 AGPAT4-IT1Q9H0P7 198 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 ZFP30Q9Y2G7 519 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 MCM3APO60318 1980 aa1.27□□□□□ -2.21
HMGB1P9-201ENST00000429856 TNRC6BQ9UPQ9 1833 aaKnown RBP1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 LRP5O75197 1615 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 CCNB3Q8WWL7 1395 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 F8W1H4 67 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 J3QLW9 94 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 ADCYAP1P18509 176 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 GNG4P50150 75 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 KRTAP12-3P60328 96 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 C10orf55Q5SWW7 151 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 ZNF431Q8TF32 576 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 C4orf3Q8WVX3 66 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 PPP3R2Q96LZ3 170 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 TAS2R8Q9NYW2 309 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 ORMDL1Q9P0S3 153 aa1.26□□□□□ -2.21
HMGB1P9-201ENST00000429856 SDK1Q7Z5N4 2213 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 INTS1Q8N201 2190 aaKnown RBP1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 CECR2Q9BXF3 1484 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 MRC2Q9UBG0 1479 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 TRBV6-5A0A0K0K1A5 114 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 PRB4P10163 310 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 COX7CP15954 63 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 PPP3R1P63098 170 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 C15orf53Q8NAA6 179 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 OR10AG1Q8NH19 301 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 VSTM2AQ8TAG5 236 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 LSM10Q969L4 123 aaKnown RBP1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 ZNF625Q96I27 306 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 REG4Q9BYZ8 158 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 RERGLQ9H628 205 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 QRICH2Q9H0J4 1663 aa1.25□□□□□ -2.21
HMGB1P9-201ENST00000429856 A2ML1A8K2U0 1454 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 MYOM2P54296 1465 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 CEP350Q5VT06 3117 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 A0A1W2PRS3 328 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 KLF7O75840 302 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 IGHV3-33P01772 117 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 TPPP2P59282 170 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 DEFB103AP81534 67 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 CATR1Q13166 79 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 FAM74A1Q5RGS3 127 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 OR2T2Q6IF00 324 aa1.24□□□□□ -2.21
HMGB1P9-201ENST00000429856 DYNLRB2Q8TF09 96 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms