RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 GIG44P09565 113 aaPredicted RBP6.5□□□□□ -1.37
SMC6-204ENST00000428868 CDKN1BP46527 198 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 ANXA2RQ3ZCQ2 193 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 CT83Q5H943 113 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 STHQ8IWL8 128 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 PGLYRP4Q96LB8 373 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 PYGO2Q9BRQ0 406 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 TP53TG3Q9ULZ0 132 aa6.5□□□□□ -1.37
SMC6-204ENST00000428868 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 GNRH2O43555 120 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 TYMSP04818 313 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 IGLC6P0CF74 106 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 MRPL54Q6P161 138 aaKnown RBP6.49□□□□□ -1.37
SMC6-204ENST00000428868 IMMP2LQ96T52 175 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 FAM110AQ9BQ89 295 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 SRD5A3Q9H8P0 318 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 XCL2Q9UBD3 114 aa6.49□□□□□ -1.37
SMC6-204ENST00000428868 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 A8MWL6 223 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 ARMS2P0C7Q2 107 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 S100PP25815 95 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 TSPOP30536 169 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 KCNIP4Q6PIL6 250 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 LYZL1Q6UWQ5 148 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 GTSCR1Q86UQ5 136 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 C1orf158Q8N1D5 194 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 FAM210BQ96KR6 192 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 CLUHP3Q96NS8 147 aa6.48□□□□□ -1.37
SMC6-204ENST00000428868 H3BVH4 76 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 RAB5AP20339 215 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
SMC6-204ENST00000428868 SSTP61278 116 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 EGFEM1PQ0D2K5 195 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 SAMD5Q5TGI4 173 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 TPPP3Q9BW30 176 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 GFRA4Q9GZZ7 299 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
SMC6-204ENST00000428868 TIMM8BQ9Y5J9 83 aaPredicted RBP6.47□□□□□ -1.37
SMC6-204ENST00000428868 IGHV1OR15-1A0A075B7D0 117 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 INSP01308 110 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 RNASE3P12724 160 aaKnown RBP6.46□□□□□ -1.38
SMC6-204ENST00000428868 CTRLP40313 264 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 RPS20P60866 119 aaKnown RBP6.46□□□□□ -1.38
SMC6-204ENST00000428868 FER1L6-AS1Q8NA97 138 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 OR10AG1Q8NH19 301 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 MSRB1Q9NZV6 116 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 MDFICQ9P1T7 246 aa6.46□□□□□ -1.38
SMC6-204ENST00000428868 IGHV3OR16-12A0A075B7B8 117 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 IGHV3-16A0A0C4DH30 117 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 PHOX2AO14813 284 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 SNAI2O43623 268 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 PRB2P02812 416 aaPredicted RBP6.45□□□□□ -1.38
SMC6-204ENST00000428868 HTN1P15515 57 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 AZU1P20160 251 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
SMC6-204ENST00000428868 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
SMC6-204ENST00000428868 FAM159AQ6UWV7 190 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 TMEM136Q6ZRR5 245 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 CSNK1G2-AS1Q8NCQ2 148 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 BTF3L4Q96K17 158 aa6.45□□□□□ -1.38
SMC6-204ENST00000428868 SSBP4Q9BWG4 385 aaPredicted RBP6.45□□□□□ -1.38
SMC6-204ENST00000428868 TMA7Q9Y2S6 64 aaKnown RBP6.45□□□□□ -1.38
SMC6-204ENST00000428868 HUWE1Q7Z6Z7 4374 aaKnown RBP6.45□□□□□ -1.38
SMC6-204ENST00000428868 TRAV9-1A0A075B6T8 112 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 FAM231BA6NCW3 169 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 TRGC2P03986 189 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 IGHV4-30-4P0DP06 118 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 ASIPP42127 132 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 CAMPP49913 170 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 TDRG1Q3Y452 100 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 DNLZQ5SXM8 178 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 ZFP82Q8N141 532 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 DNAH9Q9NYC9 4486 aa6.44□□□□□ -1.38
SMC6-204ENST00000428868 LOC102724200A0A096LPH7 203 aaPredicted RBP6.43□□□□□ -1.38
SMC6-204ENST00000428868 A0A1B0GUT8 65 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 XKRY2A2RUG3 117 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 SNURFLB1AK76 121 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 AMBPP02760 352 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 OR5AL1P0C617 328 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 FABP9Q0Z7S8 132 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 C9orf85Q96MD7 179 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 LINC01587Q99440 93 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 SCRT2Q9NQ03 307 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 NOTCH1P46531 2555 aa6.43□□□□□ -1.38
SMC6-204ENST00000428868 NBEAL2Q6ZNJ1 2754 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 CBY3A6NI87 242 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 NTF3P20783 257 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 S100A4P26447 101 aaKnown RBP6.42□□□□□ -1.38
SMC6-204ENST00000428868 RAB4BP61018 213 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 HBBP68871 147 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 SLAQ13239 276 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 KIAA1644Q3SXP7 199 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 MORN3Q6PF18 240 aaPredicted RBP6.42□□□□□ -1.38
SMC6-204ENST00000428868 ATP5L2Q7Z4Y8 100 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 C11orf72Q8NBR9 251 aa6.42□□□□□ -1.38
SMC6-204ENST00000428868 FRZBQ92765 325 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms