RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 A0A1W2PRE2 83 aa14.41□□□□□ -0.1
HSPG2-205ENST00000427897 F6UZH7 168 aa14.41□□□□□ -0.1
HSPG2-205ENST00000427897 PPT1P50897 306 aa14.41□□□□□ -0.1
HSPG2-205ENST00000427897 C1orf134Q5TEV5 83 aa14.41□□□□□ -0.1
HSPG2-205ENST00000427897 ALKAL2Q6UX46 152 aa14.41□□□□□ -0.1
HSPG2-205ENST00000427897 SPXQ9BT56 116 aa14.41□□□□□ -0.1
HSPG2-205ENST00000427897 LINC00588Q9Y4M8 146 aa14.41□□□□□ -0.1
HSPG2-205ENST00000427897 TRAV1-1A0A0B4J248 108 aa14.4□□□□□ -0.1
HSPG2-205ENST00000427897 PAX4O43316 350 aa14.4□□□□□ -0.1
HSPG2-205ENST00000427897 SLAQ13239 276 aa14.4□□□□□ -0.1
HSPG2-205ENST00000427897 MDFICQ9P1T7 246 aa14.4□□□□□ -0.1
HSPG2-205ENST00000427897 ARL2-SNX15V9GYD0 113 aa14.4□□□□□ -0.1
HSPG2-205ENST00000427897 TRGV4A0A0C4DH28 118 aa14.39□□□□□ -0.11
HSPG2-205ENST00000427897 IFNA7P01567 189 aa14.39□□□□□ -0.11
HSPG2-205ENST00000427897 TCRAP04437 139 aa14.39□□□□□ -0.11
HSPG2-205ENST00000427897 Q6ZR54 194 aa14.39□□□□□ -0.11
HSPG2-205ENST00000427897 ZNRF2Q8NHG8 242 aa14.39□□□□□ -0.11
HSPG2-205ENST00000427897 KCNS1Q96KK3 526 aa14.39□□□□□ -0.11
HSPG2-205ENST00000427897 EPDR1Q9UM22 224 aa14.39□□□□□ -0.11
HSPG2-205ENST00000427897 NACAE9PAV3 2078 aa14.38□□□□□ -0.11
HSPG2-205ENST00000427897 Q9H8V8 135 aa14.38□□□□□ -0.11
HSPG2-205ENST00000427897 SDF2L1Q9HCN8 221 aa14.38□□□□□ -0.11
HSPG2-205ENST00000427897 PRO0255Q9UI72 69 aa14.38□□□□□ -0.11
HSPG2-205ENST00000427897 PSG8Q9UQ74 426 aa14.38□□□□□ -0.11
HSPG2-205ENST00000427897 NBDYA0A0U1RRE5 68 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 RTL8CO15255 209 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 GNRH2O43555 120 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 UBE2G2P60604 165 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 BLOC1S1P78537 153 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 PRNTQ86SH4 94 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 TVP23CQ96ET8 276 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 HHLA3Q9XRX5 114 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 ICOSQ9Y6W8 199 aa14.37□□□□□ -0.11
HSPG2-205ENST00000427897 A0A1B0GV50 99 aa14.36□□□□□ -0.11
HSPG2-205ENST00000427897 FBLL1A6NHQ2 334 aaKnown RBP14.36□□□□□ -0.11
HSPG2-205ENST00000427897 FAM74A7A6NL05 159 aa14.36□□□□□ -0.11
HSPG2-205ENST00000427897 GGTLC3B5MD39 225 aa14.36□□□□□ -0.11
HSPG2-205ENST00000427897 FLI1Q01543 452 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-205ENST00000427897 ESRGQ1W209 222 aa14.36□□□□□ -0.11
HSPG2-205ENST00000427897 CYB561D1Q8N8Q1 229 aa14.36□□□□□ -0.11
HSPG2-205ENST00000427897 VSIG2Q96IQ7 327 aa14.36□□□□□ -0.11
HSPG2-205ENST00000427897 TCEAL7Q9BRU2 100 aa14.36□□□□□ -0.11
HSPG2-205ENST00000427897 TDRG1Q3Y452 100 aa14.35□□□□□ -0.11
HSPG2-205ENST00000427897 SMUG1Q53HV7 270 aa14.35□□□□□ -0.11
HSPG2-205ENST00000427897 SAPCD1Q5SSQ6 148 aa14.35□□□□□ -0.11
HSPG2-205ENST00000427897 MANBALQ9NQG1 85 aa14.35□□□□□ -0.11
HSPG2-205ENST00000427897 A0A096LPF7 62 aa14.34□□□□□ -0.11
HSPG2-205ENST00000427897 GCGP01275 180 aa14.34□□□□□ -0.11
HSPG2-205ENST00000427897 CST9LP1Q5W188 147 aa14.34□□□□□ -0.11
HSPG2-205ENST00000427897 TMEM75Q8N9X5 138 aa14.34□□□□□ -0.11
HSPG2-205ENST00000427897 C8orf49Q96NF6 230 aa14.34□□□□□ -0.11
HSPG2-205ENST00000427897 BIRC6Q9NR09 4857 aa14.34□□□□□ -0.11
HSPG2-205ENST00000427897 M0R2P5 195 aa14.33□□□□□ -0.12
HSPG2-205ENST00000427897 IFNA1P01562 189 aa14.33□□□□□ -0.12
HSPG2-205ENST00000427897 TTC32Q5I0X7 151 aa14.33□□□□□ -0.12
HSPG2-205ENST00000427897 TEX261Q6UWH6 196 aa14.33□□□□□ -0.12
HSPG2-205ENST00000427897 OR4C5Q8NGB2 326 aa14.33□□□□□ -0.12
HSPG2-205ENST00000427897 PCNPQ8WW12 178 aaKnown RBP14.33□□□□□ -0.12
HSPG2-205ENST00000427897 IGHV3-16A0A0C4DH30 117 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 PAGE4O60829 102 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 TYMSP04818 313 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 SFTA3P0C7M3 94 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 CRYBA4P53673 196 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 FHL2Q14192 279 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 MRPL23Q16540 153 aaKnown RBP14.32□□□□□ -0.12
HSPG2-205ENST00000427897 C6orf223Q8N319 242 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 RASL10AQ92737 203 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 HIST1H2BAQ96A08 127 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 MRPS16Q9Y3D3 137 aaKnown RBP14.32□□□□□ -0.12
HSPG2-205ENST00000427897 FRAS1Q86XX4 4008 aa14.32□□□□□ -0.12
HSPG2-205ENST00000427897 DNAH6Q9C0G6 4158 aa14.31□□□□□ -0.12
HSPG2-205ENST00000427897 ZNF479Q96JC4 524 aa14.31□□□□□ -0.12
HSPG2-205ENST00000427897 GNG13Q9P2W3 67 aa14.31□□□□□ -0.12
HSPG2-205ENST00000427897 TRAV34A0A0B4J273 112 aa14.3□□□□□ -0.12
HSPG2-205ENST00000427897 C9JCJ5 164 aa14.3□□□□□ -0.12
HSPG2-205ENST00000427897 PFN1P07737 140 aaKnown RBP14.3□□□□□ -0.12
HSPG2-205ENST00000427897 TAGLN2P37802 199 aaKnown RBP14.3□□□□□ -0.12
HSPG2-205ENST00000427897 CCL20P78556 96 aa14.3□□□□□ -0.12
HSPG2-205ENST00000427897 TXNDC17Q9BRA2 123 aa14.3□□□□□ -0.12
HSPG2-205ENST00000427897 UPK3BQ9BT76 320 aa14.3□□□□□ -0.12
HSPG2-205ENST00000427897 TRAV4A0A0B4J268 109 aa14.29□□□□□ -0.12
HSPG2-205ENST00000427897 PEX7O00628 323 aa14.29□□□□□ -0.12
HSPG2-205ENST00000427897 ZNF80P51504 273 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-205ENST00000427897 LINC00479Q96M42 142 aa14.29□□□□□ -0.12
HSPG2-205ENST00000427897 IGLV2-11P01706 119 aa14.28□□□□□ -0.12
HSPG2-205ENST00000427897 SRIP30626 198 aa14.28□□□□□ -0.12
HSPG2-205ENST00000427897 UBE2G1P62253 170 aa14.28□□□□□ -0.12
HSPG2-205ENST00000427897 NEGR1Q7Z3B1 354 aa14.28□□□□□ -0.12
HSPG2-205ENST00000427897 FABP5P3A8MUU1 101 aa14.27□□□□□ -0.13
HSPG2-205ENST00000427897 ORM1P02763 201 aa14.27□□□□□ -0.13
HSPG2-205ENST00000427897 S100A4P26447 101 aaKnown RBP14.27□□□□□ -0.13
HSPG2-205ENST00000427897 ZNF876PQ49A33 203 aa14.27□□□□□ -0.13
HSPG2-205ENST00000427897 LYPD6BQ8NI32 183 aa14.27□□□□□ -0.13
HSPG2-205ENST00000427897 A0A1B0GVY2 172 aa14.26□□□□□ -0.13
HSPG2-205ENST00000427897 BCL2P10415 239 aa14.26□□□□□ -0.13
HSPG2-205ENST00000427897 GYPEP15421 78 aa14.26□□□□□ -0.13
HSPG2-205ENST00000427897 DNAH10Q8IVF4 4471 aa14.26□□□□□ -0.13
HSPG2-205ENST00000427897 MUC4Q99102 2169 aa14.25□□□□□ -0.13
HSPG2-205ENST00000427897 SIVA1O15304 175 aa14.25□□□□□ -0.13
HSPG2-205ENST00000427897 AKR1C3P42330 323 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms