RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 GAGE12GP0CL81 117 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 GAGE12IP0CL82 117 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 LGALS9BQ3B8N2 356 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 LGALS9CQ6DKI2 356 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 TMEM183AQ8IXX5 376 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 MDFICQ9P1T7 246 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 GNG13Q9P2W3 67 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 ALMS1Q8TCU4 4167 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 S100A9P06702 114 aaKnown RBP16.55■□□□□ 0.24
PDGFA-205ENST00000426681 AKR1C3P42330 323 aa16.55■□□□□ 0.24
PDGFA-205ENST00000426681 UBE2G1P62253 170 aa16.55■□□□□ 0.24
PDGFA-205ENST00000426681 TXNDC17Q9BRA2 123 aa16.55■□□□□ 0.24
PDGFA-205ENST00000426681 C11orf21Q9P2W6 132 aa16.55■□□□□ 0.24
PDGFA-205ENST00000426681 BOLA1Q9Y3E2 137 aa16.55■□□□□ 0.24
PDGFA-205ENST00000426681 SACSQ9NZJ4 4579 aa16.54■□□□□ 0.24
PDGFA-205ENST00000426681 TRGV1A0A0A0MS02 117 aa16.54■□□□□ 0.24
PDGFA-205ENST00000426681 GNRH2O43555 120 aa16.54■□□□□ 0.24
PDGFA-205ENST00000426681 LTAP01374 205 aa16.54■□□□□ 0.24
PDGFA-205ENST00000426681 ALKAL2Q6UX46 152 aa16.54■□□□□ 0.24
PDGFA-205ENST00000426681 SPXQ9BT56 116 aa16.54■□□□□ 0.24
PDGFA-205ENST00000426681 SDF2L1Q9HCN8 221 aa16.54■□□□□ 0.24
PDGFA-205ENST00000426681 IGHV3-16A0A0C4DH30 117 aa16.53■□□□□ 0.24
PDGFA-205ENST00000426681 SCO2A0A1W2PP80 73 aa16.53■□□□□ 0.24
PDGFA-205ENST00000426681 F5H768 121 aa16.53■□□□□ 0.24
PDGFA-205ENST00000426681 LY6G6CO95867 125 aa16.53■□□□□ 0.24
PDGFA-205ENST00000426681 TMEM88Q6PEY1 159 aa16.53■□□□□ 0.24
PDGFA-205ENST00000426681 DNAH1Q9P2D7 4330 aa16.53■□□□□ 0.24
PDGFA-205ENST00000426681 RYR3Q15413 4870 aa16.53■□□□□ 0.24
PDGFA-205ENST00000426681 FABP5P3A8MUU1 101 aa16.52■□□□□ 0.24
PDGFA-205ENST00000426681 TYMSP04818 313 aa16.52■□□□□ 0.24
PDGFA-205ENST00000426681 RYR2Q92736 4967 aa16.52■□□□□ 0.23
PDGFA-205ENST00000426681 TRGV2A0A075B6R0 118 aa16.51■□□□□ 0.23
PDGFA-205ENST00000426681 C11orf52Q96A22 123 aa16.51■□□□□ 0.23
PDGFA-205ENST00000426681 ZC2HC1AQ96GY0 325 aa16.51■□□□□ 0.23
PDGFA-205ENST00000426681 IFNA1P01562 189 aa16.5■□□□□ 0.23
PDGFA-205ENST00000426681 BLOC1S1P78537 153 aa16.5■□□□□ 0.23
PDGFA-205ENST00000426681 MRPL16Q9NX20 251 aaKnown RBP16.5■□□□□ 0.23
PDGFA-205ENST00000426681 TAGLN2P37802 199 aaKnown RBP16.49■□□□□ 0.23
PDGFA-205ENST00000426681 CRIP1P50238 77 aa16.49■□□□□ 0.23
PDGFA-205ENST00000426681 MEF2BQ02080 365 aaPredicted RBP16.49■□□□□ 0.23
PDGFA-205ENST00000426681 RASL10AQ92737 203 aa16.49■□□□□ 0.23
PDGFA-205ENST00000426681 BCL2P10415 239 aa16.48■□□□□ 0.23
PDGFA-205ENST00000426681 HOXA5P20719 270 aa16.48■□□□□ 0.23
PDGFA-205ENST00000426681 C15orf53Q8NAA6 179 aa16.48■□□□□ 0.23
PDGFA-205ENST00000426681 LYPD6BQ8NI32 183 aa16.48■□□□□ 0.23
PDGFA-205ENST00000426681 MUC4Q99102 2169 aa16.48■□□□□ 0.23
PDGFA-205ENST00000426681 FAM162BQ5T6X4 162 aa16.47■□□□□ 0.23
PDGFA-205ENST00000426681 IGKV3D-20A0A0C4DH25 116 aa16.46■□□□□ 0.23
PDGFA-205ENST00000426681 M0R2P5 195 aa16.46■□□□□ 0.23
PDGFA-205ENST00000426681 PDE6DO43924 150 aa16.46■□□□□ 0.23
PDGFA-205ENST00000426681 OR5I1Q13606 314 aa16.46■□□□□ 0.23
PDGFA-205ENST00000426681 ZNF674Q2M3X9 581 aa16.46■□□□□ 0.23
PDGFA-205ENST00000426681 MLST8Q9BVC4 326 aa16.46■□□□□ 0.23
PDGFA-205ENST00000426681 VAX2Q9UIW0 290 aa16.46■□□□□ 0.23
PDGFA-205ENST00000426681 SH2D1AO60880 128 aa16.45■□□□□ 0.22
PDGFA-205ENST00000426681 P0DMU3 169 aa16.45■□□□□ 0.22
PDGFA-205ENST00000426681 FAM231AP0DMU4 169 aa16.45■□□□□ 0.22
PDGFA-205ENST00000426681 FAM231CP0DMU5 169 aa16.45■□□□□ 0.22
PDGFA-205ENST00000426681 RPL35P42766 123 aaKnown RBP16.45■□□□□ 0.22
PDGFA-205ENST00000426681 BAGE2Q86Y30 109 aa16.45■□□□□ 0.22
PDGFA-205ENST00000426681 H3BNG1 76 aa16.44■□□□□ 0.22
PDGFA-205ENST00000426681 C9orf85Q96MD7 179 aa16.44■□□□□ 0.22
PDGFA-205ENST00000426681 TRAV26-1A0A087WT03 109 aa16.43■□□□□ 0.22
PDGFA-205ENST00000426681 ORM1P02763 201 aa16.43■□□□□ 0.22
PDGFA-205ENST00000426681 NHLRC2Q8NBF2 726 aa16.43■□□□□ 0.22
PDGFA-205ENST00000426681 PTH2Q96A98 100 aa16.43■□□□□ 0.22
PDGFA-205ENST00000426681 DERL1Q9BUN8 251 aa16.43■□□□□ 0.22
PDGFA-205ENST00000426681 KRBOX1C9JBD0 128 aa16.42■□□□□ 0.22
PDGFA-205ENST00000426681 RNASE3P12724 160 aaKnown RBP16.42■□□□□ 0.22
PDGFA-205ENST00000426681 DNLZQ5SXM8 178 aa16.42■□□□□ 0.22
PDGFA-205ENST00000426681 B4DEV8 164 aa16.41■□□□□ 0.22
PDGFA-205ENST00000426681 HYDINQ4G0P3 5121 aa16.4■□□□□ 0.22
PDGFA-205ENST00000426681 LINC01559Q495D7 138 aa16.4■□□□□ 0.22
PDGFA-205ENST00000426681 POM121L12Q8N7R1 296 aa16.4■□□□□ 0.22
PDGFA-205ENST00000426681 MED9Q9NWA0 146 aa16.4■□□□□ 0.22
PDGFA-205ENST00000426681 IGHV3-53P01767 116 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 ASIPP42127 132 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 SLAQ13239 276 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 FHL2Q14192 279 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 RNF212Q495C1 297 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 ZNF876PQ49A33 203 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 ZNF575Q86XF7 245 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 VSIG2Q96IQ7 327 aa16.39■□□□□ 0.21
PDGFA-205ENST00000426681 VPS13DQ5THJ4 4388 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 TRAV4A0A0B4J268 109 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 RBFOX3A6NFN3 312 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 M0R036 132 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 NUDT3O95989 172 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 CENPWQ5EE01 88 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 SMIM12Q96EX1 92 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 ZNF479Q96JC4 524 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 IL36BQ9NZH7 164 aa16.38■□□□□ 0.21
PDGFA-205ENST00000426681 A0A0J9YY99 117 aa16.37■□□□□ 0.21
PDGFA-205ENST00000426681 S100A4P26447 101 aaKnown RBP16.37■□□□□ 0.21
PDGFA-205ENST00000426681 TEX261Q6UWH6 196 aa16.37■□□□□ 0.21
PDGFA-205ENST00000426681 PRO0255Q9UI72 69 aa16.37■□□□□ 0.21
PDGFA-205ENST00000426681 RAB19A4D1S5 217 aa16.36■□□□□ 0.21
PDGFA-205ENST00000426681 C9JCJ5 164 aa16.36■□□□□ 0.21
PDGFA-205ENST00000426681 ZNF506Q5JVG8 444 aa16.36■□□□□ 0.21
PDGFA-205ENST00000426681 PIK3CD-AS1Q5SR53 167 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms