RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 YPEL1O60688 119 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 LIMS3P0CW19 117 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 LIMS4P0CW20 117 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 CBLN1P23435 193 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 BLCAPP62952 87 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ENDOGQ14249 297 aaKnown RBP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 PMCHL1Q16048 86 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ZNF506Q5JVG8 444 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 DMKNQ6E0U4 476 aaPredicted RBP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 SLC25A48Q6ZT89 311 aaKnown RBP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ZFP82Q8N141 532 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ZNF491Q8N8L2 437 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 RNF133Q8WVZ7 376 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ZNF48Q96MX3 618 aaPredicted RBP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 YPEL2Q96QA6 119 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 FAAP24Q9BTP7 215 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 INS-IGF2F8WCM5 200 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 J3QR89 54 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 GEMIN2O14893 280 aaKnown RBP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ATP5LO75964 103 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 CXCL2P19875 107 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 SPINK9Q5DT21 86 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 CASC10Q5T4H9 136 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 LCE2CQ5TA81 110 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 LYZL1Q6UWQ5 148 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 TEX43Q6ZNM6 134 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 LYZL2Q7Z4W2 148 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 FER1L6-AS1Q8NA97 138 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 NAT8Q9UHE5 227 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 H3BQ15 152 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 APOC3P02656 99 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 PRKACGP22612 351 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 PRNTQ86SH4 94 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 PRIMA1Q86XR5 153 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 PSMG3Q9BT73 122 aaPredicted RBP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 SELENOKQ9Y6D0 94 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 HSPG2P98160 4391 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 TRAV12-3A0A0B4J271 114 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 IGKV1-8A0A0C4DH67 115 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 TRBV4-1A0A0J9YWV2 114 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 A0A1W2PPI3 338 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ETV2O00321 342 aaPredicted RBP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 LINC00869P0C866 280 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 SEC11AP67812 179 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 EWSR1Q01844 656 aaKnown RBP eCLIP2.75□□□□□ -1.97
TOP2A-201ENST00000423485 TAL2Q16559 108 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 PQLC2Q6ZP29 291 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 OR10G8Q8NGN5 311 aa2.75□□□□□ -1.97
TOP2A-201ENST00000423485 ETDCA0A1B0GVM5 59 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 FAM90A9PA6NNJ1 464 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 LINC00473A8K010 186 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 CDC42EP2O14613 210 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 CGAP01215 116 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 TWIST1Q15672 202 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 C16orf54Q6UWD8 224 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 APRG1Q8IVJ8 170 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 FAM19A2Q8N3H0 131 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 SPSB4Q96A44 273 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 IFI27L2Q9H2X8 130 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 Q9H8V8 135 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 IGLV3-9A0A075B6K5 115 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 TRBV5-5A0A0J9YX44 114 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 C2orf70A6NJV1 201 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 A8MWV9 139 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 G3V318 75 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 IGLV1-44P01699 117 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 FABP9Q0Z7S8 132 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 UBE2V2Q15819 145 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 TEX36Q5VZQ5 186 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 FA2HQ7L5A8 372 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM170AQ8WVE7 144 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 SMIM19Q96E16 107 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 LINC01600Q96MT4 127 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 PRO0255Q9UI72 69 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 KCNE3Q9Y6H6 103 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 ZNF705GA8MUZ8 300 aaPredicted RBP2.74□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM250H0YL14 139 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 MED14OSP0DP75 135 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 XCL1P47992 114 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 GPR146Q96CH1 333 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 CITED1Q99966 193 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM243Q9BU79 118 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 EIF5A2Q9GZV4 153 aaKnown RBP2.74□□□□□ -1.97
TOP2A-201ENST00000423485 RBKSQ9H477 322 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 ESM1Q9NQ30 184 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 HHLA3Q9XRX5 114 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 PAM16Q9Y3D7 125 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 IGHV4-28A0A0C4DH34 117 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 PCP4L1A6NKN8 68 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 ODF3BA8MYP8 253 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 NPSP0C0P6 89 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 NDPQ00604 133 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 MSMPQ1L6U9 139 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 ASPHD1Q5U4P2 390 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 OR11H6Q8NGC7 330 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 MYOZ3Q8TDC0 251 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 RNF125Q96EQ8 232 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 TVP23CQ96ET8 276 aa2.74□□□□□ -1.97
TOP2A-201ENST00000423485 C11orf68Q9H3H3 251 aaKnown RBP2.74□□□□□ -1.97
TOP2A-201ENST00000423485 F11RQ9Y624 299 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms