RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 PIFOQ8TCI5 191 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 SRRM4A7MD48 611 aaKnown RBP5.33□□□□□ -1.56
CNOT4-205ENST00000423368 HLA-DMBP28068 263 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 RPS21P63220 83 aaKnown RBP5.33□□□□□ -1.56
CNOT4-205ENST00000423368 Q86TA4 180 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 FAM223AQ8IWN6 122 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 TMEM86BQ8N661 226 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 DEFB119Q8N690 84 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 LINC00482Q8N8I6 264 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 C8orf31Q8N9H6 132 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 S4R3C0 116 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 PRRC2AP48634 2157 aaKnown RBP5.33□□□□□ -1.56
CNOT4-205ENST00000423368 IGHV3OR16-8A0A075B7F1 116 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 CRIP1P50238 77 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 UBE2D1P51668 147 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 PCBD1P61457 104 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 ZCCHC24Q8N2G6 241 aaKnown RBP5.33□□□□□ -1.56
CNOT4-205ENST00000423368 LINC00311Q8N616 119 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 POM121L12Q8N7R1 296 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 SMCR5Q8TEV8 140 aa5.33□□□□□ -1.56
CNOT4-205ENST00000423368 A0A1W2PQD3 144 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 IGKV1-16P04430 117 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 TNFAIP6P98066 277 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-205ENST00000423368 C1orf229Q6ZS94 237 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-205ENST00000423368 OOEPA6NGQ2 149 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 CGB1A6NKQ9 187 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 NTN3O00634 580 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-205ENST00000423368 CXCL13O43927 109 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 IGLV3-21P80748 117 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-205ENST00000423368 SS18Q15532 418 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 Q6P435 159 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 SCGB3A1Q96QR1 104 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 ZZEF1O43149 2961 aa5.32□□□□□ -1.56
CNOT4-205ENST00000423368 TMEM30CPA0ZSE6 113 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 E7EUB6 86 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 ATXN8Q156A1 80 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 SRXN1Q9BYN0 137 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 SPANXA1Q9NS26 97 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 ZNF785A8K8V0 405 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 Q6ZS92 163 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 NRACQ8N912 160 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 FMC1Q96HJ9 113 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 ADGRG4Q8IZF6 3080 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 CEP192Q8TEP8 1941 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 A0A0U1RRA0 63 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 C15orf61A6NNL5 157 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 TEX36Q5VZQ5 186 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 DTX2Q86UW9 622 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 RPS19BP1Q86WX3 136 aaKnown RBP5.31□□□□□ -1.56
CNOT4-205ENST00000423368 MPLKIPQ8TAP9 179 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 METTL26Q96S19 204 aa5.31□□□□□ -1.56
CNOT4-205ENST00000423368 COL5A1P20908 1838 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-205ENST00000423368 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 FAM90A7PA6NKC0 464 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 FAM90A22PA8MWA6 464 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 FAM90A12PA8MX19 464 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 H7C423 109 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 TRIAP1O43715 76 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 HIST1H4AP62805 103 aaKnown RBP5.3□□□□□ -1.56
CNOT4-205ENST00000423368 RBM3P98179 157 aaKnown RBP5.3□□□□□ -1.56
CNOT4-205ENST00000423368 ZNRF2Q8NHG8 242 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 ZNF714Q96N38 554 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 GFRA4Q9GZZ7 299 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 SPTAN1Q13813 2472 aaKnown RBP5.3□□□□□ -1.56
CNOT4-205ENST00000423368 IGKV2-40A0A087WW87 121 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-205ENST00000423368 IQCF6A8MYZ5 107 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 IGKV2D-40P01614 121 aaPredicted RBP5.3□□□□□ -1.56
CNOT4-205ENST00000423368 TDHQ8IZJ6 230 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 Q8N8P6 123 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 RNF138Q8WVD3 245 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 DPH3P1Q9H4G8 78 aa5.3□□□□□ -1.56
CNOT4-205ENST00000423368 DLX6P56179 175 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 IGHV1-45A0A0A0MS14 117 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 F8VRH5 84 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 TRGV3P03979 118 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 RNASE2P10153 161 aaKnown RBP5.29□□□□□ -1.56
CNOT4-205ENST00000423368 LIFP15018 202 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 SYNJ2BPP57105 145 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 NXPH1P58417 271 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 CD69Q07108 199 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 SBSPONQ8IVN8 264 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 WFDC9Q8NEX5 89 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 LINC00474Q9P2X8 69 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 PEMTQ9UBM1 199 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 IGHV3-35A0A0C4DH35 117 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 UPK2O00526 184 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 IGHV3-33P01772 117 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 CRYGBP07316 175 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 PLNP26678 52 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 PAX8Q06710 450 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 C10orf128Q5T292 105 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 WDR86Q86TI4 376 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 MUSTN1Q8IVN3 82 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 PRR25Q96S07 402 aa5.29□□□□□ -1.56
CNOT4-205ENST00000423368 TMEM131Q92545 1883 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 MAP1AP78559 2803 aaPredicted RBP5.28□□□□□ -1.56
CNOT4-205ENST00000423368 CHD9Q3L8U1 2897 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 TRGV5A0A0B4J1U4 118 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms