RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 KCNS1Q96KK3 526 aa14.64□□□□□ -0.07
HMGXB4-203ENST00000420166 SDF2L1Q9HCN8 221 aa14.64□□□□□ -0.07
HMGXB4-203ENST00000420166 C11orf21Q9P2W6 132 aa14.64□□□□□ -0.07
HMGXB4-203ENST00000420166 MDFICQ9P1T7 246 aa14.63□□□□□ -0.07
HMGXB4-203ENST00000420166 FABP5P3A8MUU1 101 aa14.62□□□□□ -0.07
HMGXB4-203ENST00000420166 HTN3P15516 51 aa14.62□□□□□ -0.07
HMGXB4-203ENST00000420166 RPL35P42766 123 aaKnown RBP14.62□□□□□ -0.07
HMGXB4-203ENST00000420166 Q6ZTI0 123 aa14.62□□□□□ -0.07
HMGXB4-203ENST00000420166 DERL1Q9BUN8 251 aa14.62□□□□□ -0.07
HMGXB4-203ENST00000420166 IGHV3-16A0A0C4DH30 117 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 GAGE12BA1L429 117 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 GNRH2O43555 120 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 GAGE7O76087 117 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 TYMSP04818 313 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 GAGE12FP0CL80 117 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 GAGE12GP0CL81 117 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 GAGE12IP0CL82 117 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 BAGE2Q86Y30 109 aa14.61□□□□□ -0.07
HMGXB4-203ENST00000420166 RBFOX3A6NFN3 312 aa14.6□□□□□ -0.07
HMGXB4-203ENST00000420166 SPINK4O60575 86 aa14.6□□□□□ -0.07
HMGXB4-203ENST00000420166 CRIP1P50238 77 aa14.6□□□□□ -0.07
HMGXB4-203ENST00000420166 FAM162BQ5T6X4 162 aa14.6□□□□□ -0.07
HMGXB4-203ENST00000420166 NHLRC2Q8NBF2 726 aa14.6□□□□□ -0.07
HMGXB4-203ENST00000420166 TRGV1A0A0A0MS02 117 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 IGLL5B9A064 214 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 SH2D1AO60880 128 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 ATP5G1P05496 136 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 ZNF674Q2M3X9 581 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 ZNF506Q5JVG8 444 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 SPXQ9BT56 116 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 MLST8Q9BVC4 326 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 MED9Q9NWA0 146 aa14.59□□□□□ -0.07
HMGXB4-203ENST00000420166 MUC4Q99102 2169 aa14.58□□□□□ -0.07
HMGXB4-203ENST00000420166 LGALS9BQ3B8N2 356 aa14.58□□□□□ -0.08
HMGXB4-203ENST00000420166 MRPL16Q9NX20 251 aaKnown RBP14.58□□□□□ -0.08
HMGXB4-203ENST00000420166 IGHV4-4A0A075B6R2 117 aa14.57□□□□□ -0.08
HMGXB4-203ENST00000420166 IGKV3D-20A0A0C4DH25 116 aa14.57□□□□□ -0.08
HMGXB4-203ENST00000420166 CENPWQ5EE01 88 aa14.57□□□□□ -0.08
HMGXB4-203ENST00000420166 TOR2AQ5JU69 321 aa14.57□□□□□ -0.08
HMGXB4-203ENST00000420166 PCNPQ8WW12 178 aaKnown RBP14.57□□□□□ -0.08
HMGXB4-203ENST00000420166 TRGV2A0A075B6R0 118 aa14.56□□□□□ -0.08
HMGXB4-203ENST00000420166 ORM1P02763 201 aa14.56□□□□□ -0.08
HMGXB4-203ENST00000420166 TCTAP57738 103 aa14.56□□□□□ -0.08
HMGXB4-203ENST00000420166 FAM210BQ96KR6 192 aa14.56□□□□□ -0.08
HMGXB4-203ENST00000420166 C18orf15Q96N68 181 aa14.56□□□□□ -0.08
HMGXB4-203ENST00000420166 FAM210AQ96ND0 272 aa14.56□□□□□ -0.08
HMGXB4-203ENST00000420166 RAB19A4D1S5 217 aa14.55□□□□□ -0.08
HMGXB4-203ENST00000420166 B4DEV8 164 aa14.55□□□□□ -0.08
HMGXB4-203ENST00000420166 F5H768 121 aa14.55□□□□□ -0.08
HMGXB4-203ENST00000420166 TMEM250H0YL14 139 aa14.55□□□□□ -0.08
HMGXB4-203ENST00000420166 APLNQ9ULZ1 77 aa14.55□□□□□ -0.08
HMGXB4-203ENST00000420166 DYNC2H1Q8NCM8 4307 aaKnown RBP14.55□□□□□ -0.08
HMGXB4-203ENST00000420166 TRBV20OR9-2A0A075B6H5 130 aa14.54□□□□□ -0.08
HMGXB4-203ENST00000420166 M0R036 132 aa14.54□□□□□ -0.08
HMGXB4-203ENST00000420166 M0R2P5 195 aa14.54□□□□□ -0.08
HMGXB4-203ENST00000420166 GNG4P50150 75 aa14.54□□□□□ -0.08
HMGXB4-203ENST00000420166 LINC01559Q495D7 138 aa14.54□□□□□ -0.08
HMGXB4-203ENST00000420166 C9orf85Q96MD7 179 aa14.54□□□□□ -0.08
HMGXB4-203ENST00000420166 EIF5A2Q9GZV4 153 aaKnown RBP14.54□□□□□ -0.08
HMGXB4-203ENST00000420166 LCE6AA0A183 80 aa14.53□□□□□ -0.08
HMGXB4-203ENST00000420166 KRBOX1C9JBD0 128 aa14.53□□□□□ -0.08
HMGXB4-203ENST00000420166 IGLV2-8P01709 118 aa14.53□□□□□ -0.08
HMGXB4-203ENST00000420166 RASL10AQ92737 203 aa14.53□□□□□ -0.08
HMGXB4-203ENST00000420166 SMIM12Q96EX1 92 aa14.53□□□□□ -0.08
HMGXB4-203ENST00000420166 NDUFAF3Q9BU61 184 aa14.53□□□□□ -0.08
HMGXB4-203ENST00000420166 NDUFS6O75380 124 aaKnown RBP14.52□□□□□ -0.09
HMGXB4-203ENST00000420166 RNASE3P12724 160 aaKnown RBP14.52□□□□□ -0.09
HMGXB4-203ENST00000420166 ASIPP42127 132 aa14.52□□□□□ -0.09
HMGXB4-203ENST00000420166 PRR27Q6MZM9 219 aa14.52□□□□□ -0.09
HMGXB4-203ENST00000420166 TMEM88Q6PEY1 159 aa14.52□□□□□ -0.09
HMGXB4-203ENST00000420166 MGST1P10620 155 aaKnown RBP14.51□□□□□ -0.09
HMGXB4-203ENST00000420166 S100A4P26447 101 aaKnown RBP14.51□□□□□ -0.09
HMGXB4-203ENST00000420166 DNLZQ5SXM8 178 aa14.51□□□□□ -0.09
HMGXB4-203ENST00000420166 PARLQ9H300 379 aa14.51□□□□□ -0.09
HMGXB4-203ENST00000420166 HOXA5P20719 270 aa14.5□□□□□ -0.09
HMGXB4-203ENST00000420166 NACAE9PAV3 2078 aa14.5□□□□□ -0.09
HMGXB4-203ENST00000420166 KMT2CQ8NEZ4 4911 aaKnown RBP14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 TMSB15BA0A087X1C1 80 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 GRIFINA4D1Z8 144 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 PGPEP1LA6NFU8 196 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 C9JCJ5 164 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 OR5I1Q13606 314 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 ZNF575Q86XF7 245 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 LINC00476Q8WZB0 136 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 IL36BQ9NZH7 164 aa14.49□□□□□ -0.09
HMGXB4-203ENST00000420166 H3BVH4 76 aa14.48□□□□□ -0.09
HMGXB4-203ENST00000420166 IGHV3-53P01767 116 aa14.48□□□□□ -0.09
HMGXB4-203ENST00000420166 PTH2Q96A98 100 aa14.48□□□□□ -0.09
HMGXB4-203ENST00000420166 PLECQ15149 4684 aaKnown RBP14.48□□□□□ -0.09
HMGXB4-203ENST00000420166 SRP19P09132 144 aaKnown RBP14.47□□□□□ -0.09
HMGXB4-203ENST00000420166 CEBPGP53567 150 aa14.47□□□□□ -0.09
HMGXB4-203ENST00000420166 RPL19P84098 196 aaKnown RBP14.47□□□□□ -0.09
HMGXB4-203ENST00000420166 ZNF876PQ49A33 203 aa14.47□□□□□ -0.09
HMGXB4-203ENST00000420166 C15orf53Q8NAA6 179 aa14.47□□□□□ -0.09
HMGXB4-203ENST00000420166 BIN3Q9NQY0 253 aa14.47□□□□□ -0.09
HMGXB4-203ENST00000420166 TRAV4A0A0B4J268 109 aa14.46□□□□□ -0.09
HMGXB4-203ENST00000420166 C19orf71A6NCJ1 209 aa14.46□□□□□ -0.09
HMGXB4-203ENST00000420166 CXCL1P09341 107 aa14.46□□□□□ -0.09
HMGXB4-203ENST00000420166 POM121L12Q8N7R1 296 aa14.46□□□□□ -0.09
HMGXB4-203ENST00000420166 TRAV26-1A0A087WT03 109 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms